Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0655 ATGGCATTATCACCATTAAGTATCTCGTTGGCCAATCTTCTCTCTCTGAAAACCCTAGGCGAGCCGGACTTTCACATCTTCTGTTTATCGGTGCAGATGGCGAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGTATAAAGAAGCCGAAGAGGCACCGCCATACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTATGCCAGGAAGCATAACAACAAGGCTGCTGAAGCGGCCACGGAGGAAGATTAA 282 0.4929 MALSPLSISLANLLSLKTLGEPDFHIFCLSVQMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNNKAAEAATEED 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0655 93 MobiDBLite consensus disorder prediction 72 93 - -
Lele21g0655 93 MobiDBLite consensus disorder prediction 38 93 - -
Lele21g0655 93 Gene3D - 33 93 - -
Lele21g0655 93 PANTHER 60S RIBOSOMAL PROTEIN L29 33 90 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele21g0655 93 Pfam Ribosomal L29e protein family 35 74 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele21g0655 93 MobiDBLite consensus disorder prediction 42 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0655 Lele-ChrLele21 4356618 4357154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0655 33 93 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 2.83e-32 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0655 21 4356618 4357154 Lele21g0655 21 4356618 4357154 ECH
Lele21g0655 21 4356618 4357154 Lele23g1381 23 18730338 18732080 hybridization