Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0634 ATGGTGGAAGAAGTGGTGATAAGGGAATTCGAGGAAGAAAGGGATGTGAAAGTGGTGGGGAAACTTGAGATGAACTGTGAGATTGGGACTAAAGAGAGGGTCTCCATTTTTACCAACCTGCTCGCTAATCACCCTTTTTCTAGGATTTGCTTCTACCCTCTTCGTCTCATCTTGGTGGCTGAGGTGGTAGAAAGTGGTGAGATTGTAGGGGTGGTTCGAGGATGCATTAAGACAATAGGGTCTCCTTCAGGATCACTCTTCAAGATAGGTTCTATACTTGGCCTCCGAGTCTCTCCTACTTTTAGAAGAAAAGGGGTGGGACAAAAACTAGTCAACTCAGTTGAAGAATGGATGCTAAGAAATGGAGCAGAGTACTCATTCGTTGCCACAGAGAAGAACAACACTGCCTCCACCAACCTCTTCTCCCTCAAATGCCACTACCTCAACCTCACTTCTCTCCAAATTTTCGTCCACCCAACTAGTTCCCCTCACAAGCACATCTCCGCCGCCTGCAGACAGGTCAAAGTGCAGAAGCTCAACATAGCCCAAGCCATCTCCTTGTACACCAGAACCTTAAAACACAAAGACCTATATCTCACAGACATGGACCTTATCTTGAAGGAGAAGCTCAGCCTCGGAACTTGGGTAACTTACTACAAAGACGATGGCAATTGGGAACTCGACAATGATCAAACTAGTAATAATGTTCCAAACTCTTGGATTGTGTTTAGCATATGGAACACATGTGAAGCGTACAAGCTTCAGGTTAGGTCAAAGTATAAGCCGTTTAGGGTTTTAATTCACACGACTCTGAAGCATGCAAGAGAGAAGATCTTCCCTTGTCTGAGAATCCCTGTGAGCGACTCGCTCTCGAGGAGGAGGCCCTTCGGGTTTCTCTTCATATATGGGCTTCATGGGGAAGGAGACAATCTCGGAGAACTGATGGAATGTGCGTGGAGGTTCACGTCGAGGTTGGGAGAAAGCATGAAGGACTGTAAAGTGGTTATAACAGAGTTAGGGTTTGGTGATCCTCTTGCGAAGCTTGTGCCTCAAACAGCTTCCATGTCTTGTATAGATGATCTGTGGTATGTTAAGAGGCTTTCAGGACAGAGTAGCGATGAGAACGAGGATGATGAAGTATTGATGAAGGGACAAGTGAGAAATGTGTTTGTTGATCCTAGGGATTTTTAG 1191 0.4559 MVEEVVIREFEEERDVKVVGKLEMNCEIGTKERVSIFTNLLANHPFSRICFYPLRLILVAEVVESGEIVGVVRGCIKTIGSPSGSLFKIGSILGLRVSPTFRRKGVGQKLVNSVEEWMLRNGAEYSFVATEKNNTASTNLFSLKCHYLNLTSLQIFVHPTSSPHKHISAACRQVKVQKLNIAQAISLYTRTLKHKDLYLTDMDLILKEKLSLGTWVTYYKDDGNWELDNDQTSNNVPNSWIVFSIWNTCEAYKLQVRSKYKPFRVLIHTTLKHAREKIFPCLRIPVSDSLSRRRPFGFLFIYGLHGEGDNLGELMECAWRFTSRLGESMKDCKVVITELGFGDPLAKLVPQTASMSCIDDLWYVKRLSGQSSDENEDDEVLMKGQVRNVFVDPRDF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0634 396 Gene3D - 6 136 - -
Lele21g0634 396 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 5 211 IPR000182 GO:0016747
Lele21g0634 396 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 141 IPR016181 -
Lele21g0634 396 CDD NAT_SF 57 125 - -
Lele21g0634 396 Pfam Acetyltransferase (GNAT) family 59 142 IPR000182 GO:0016747
Lele21g0634 396 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0634 Lele-ChrLele21 4228312 4230648 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele21g0634 Acetyltransf_1 3.6e-13 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0634 21 4228312 4230648 Lele21g0634 21 4228312 4230648 ECH
Lele21g0634 21 4228312 4230648 Lele23g1407 23 18838852 18842645 hybridization
Lele21g0634 21 4228312 4230648 Lele24g0630 24 4214814 4217159 hybridization