Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0622 ATGATCAACAACATACTCGCTTGCTTTAAGCCGAGGCGTCGCCCTGACGACGATGACGACGATTCCCCTATGGCGAGTGGGGAGGAGGGTACTAGTAGCGGCGGCGCCAGTGGGTACGGCGGCGGAGGCAGTGGTGGAAGAGAAGGTATGGACGGCTCAATTTGGTTCCTGGATAACGGGAAGCACGGCTGCGGTGAGTTCTCCATGGCGGTGGCTCAGGCCAACGTGGTTCTTGAAGATCAGTGCCAGCTCGTGTCTGGCCCGTTGGGCACTATCGTCGGCGTATACGATGGCCATGGAGGTCACGACGCGGCTCGATACGTTTGCCAACACTTGATTCAGAATTTACAAGACGAGTCACAGGAAGGGGTTACAGAAAGGAGCATTGAAGGAGCGATTGGGCGAACAGAAGAGGGATTCAGCCAACTTGTGGCACAGATATGGAATAATCGAACTAGCATAGCCACCTGCGGAACTTGCTGTCTGATTGGTGTGATTTTCCAGCAGACCTTATTCGTGGCGAACCTCGGAGATTCCCGTGTTGTGATGGGCTCAAAACTCTCCGGCAGCCATGGAGATTATCTCCCACTTCAGCTATCACAGGAACACAATGCAAATAGTGAGGATGTTAGACGGCAGCTTTATGATTTGCACCCAAATGATCCCCAAGTTGTTCAAATGAAGCGTGGGGCCTGGAGAGTAAAAGGTATCATTCAGGTTTCTAGATGTATAGGAGACATGTATATGAAAGATGCGCAGTTCAACCGGGAACCCATTGCCTCAAAATTCAGACTTACAGAACCGATGGACATGCCTTACTTGAGTGCTGATCCAGAAATTATGACTCATGCACTCACAGCAAACGATTCCTTCCTTATATTTGCATCCGATGGTTTATGGGAGTTCTTGAGTAATGCCCAAGCAGTTGATCTTGTCCGAAACAATTCACGTGCGGTAAGCTTAGCCATTCTTTGA 975 0.5015 MINNILACFKPRRRPDDDDDDSPMASGEEGTSSGGASGYGGGGSGGREGMDGSIWFLDNGKHGCGEFSMAVAQANVVLEDQCQLVSGPLGTIVGVYDGHGGHDAARYVCQHLIQNLQDESQEGVTERSIEGAIGRTEEGFSQLVAQIWNNRTSIATCGTCCLIGVIFQQTLFVANLGDSRVVMGSKLSGSHGDYLPLQLSQEHNANSEDVRRQLYDLHPNDPQVVQMKRGAWRVKGIIQVSRCIGDMYMKDAQFNREPIASKFRLTEPMDMPYLSADPEIMTHALTANDSFLIFASDGLWEFLSNAQAVDLVRNNSRAVSLAIL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0622 324 CDD PP2Cc 67 322 IPR001932 -
Lele21g0622 324 PANTHER PROTEIN PHOSPHATASE 33 317 - -
Lele21g0622 324 SUPERFAMILY PP2C-like 75 314 IPR036457 -
Lele21g0622 324 SMART PP2C_4 60 324 IPR001932 -
Lele21g0622 324 Gene3D - 56 322 IPR036457 -
Lele21g0622 324 ProSiteProfiles PPM-type phosphatase domain profile. 63 324 IPR001932 -
Lele21g0622 324 MobiDBLite consensus disorder prediction 10 44 - -
Lele21g0622 324 Pfam Protein phosphatase 2C 91 317 IPR001932 -
Lele21g0622 324 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0622 Lele-ChrLele21 4158561 4159753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0622 54 320 PP2C-type Phosphatase Gene Family AT3G17090 60.000 1.04e-115 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0622 21 4158561 4159753 Lele21g0622 21 4158561 4159753 ECH
Lele21g0622 21 4158561 4159753 Lele23g1419 23 18925528 18926765 hybridization