Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0613 ATGGATAAGAAGCGAGGGGAAGAAGAGAGCGGCGAGAGGTGGAAGAAGATGGCAAACTTCGTGACATTTTCCGATGAGATTCCGACGATGAGTAGTTCCAGTCTCATGAGCTTCCCTCAACCTCCTTCTTTCTCATCATCAACCATCTCCGACATGACGATGATGATGATGCCTCTATCGGAGAACGATTACAAGCCTAATTACTCCTCCGCCTTCATGGACTTGTTCAATCTCCAAGATTACAGTCCTTCTTTGTTCGATTGCCTCCCTTCCTCCGCCACTCACCACAACCATCACCACCCTCTTCCGTCGCCTGCGAGCTCCAACGTCCCCGAATCCTCCGAGGTCTTGAACACCACTCCGGCCTCCCCCAATTCTTCCTCCATCTCCTCTTCCTCCAATGAAACCCCCCTCGCCGATCACACCAACATCGACCAACCCAACACTAGTGATAAACAAGAACCCGACGATGAACAACACAGGGATGCAGCCAAAGGAGACGACGACCTCGATCAACACAAGACTAAGAAACAGTTGAAGCCAAAGAAGAAGAACCAGAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTCGATCAACTGGACGACGGCTATAGGTGGCGCAAGTATGGCCAAAAGGCCGTAAAAAACAGCCCATATCCCAGGAGCTATTATCGTTGCACCACCCCTGGTTGCGGCGTGAAGAAACGGGTGGAGCGGTCGTCGGAGGACCCGTCGATCGTGGTGACGACGTACGAGGGGCAACACACGCACCCGAGTCCGGTGACTAGCCGGGCGAGCCTTGTCGGGTTCGGACCCGCCACGAGGGCTAGTAGTTGTGGCGTGCTCGGTTCGCCACAACAGTTTGTGGTGCCACAAGCACAGCATCAGCATCAGCATCAGCATCATGTTCAGGAACAAGATCATGTGCAGCCACAAGACGATGCTTTGTTGTATAATAATAATAATAGCTCACCCCTACTTCTTCCTTCGAGTATCACCGATCCGACGTCGTTTTCAAGCTTCCATCGTCGTCTTTTAGGTTTTGGGCCATCGTCCACGACGGCGGCTTCTCTGTTAAGGGGCAATGGGCTGCTTCAGGATATTATTCAGATGAGGAAACAGGAGGAAGAGAAAGAGGAAGTAAAAGAAGAATAG 1170 0.5162 MDKKRGEEESGERWKKMANFVTFSDEIPTMSSSSLMSFPQPPSFSSSTISDMTMMMMPLSENDYKPNYSSAFMDLFNLQDYSPSLFDCLPSSATHHNHHHPLPSPASSNVPESSEVLNTTPASPNSSSISSSSNETPLADHTNIDQPNTSDKQEPDDEQHRDAAKGDDDLDQHKTKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPVTSRASLVGFGPATRASSCGVLGSPQQFVVPQAQHQHQHQHHVQEQDHVQPQDDALLYNNNNSSPLLLPSSITDPTSFSSFHRRLLGFGPSSTTAASLLRGNGLLQDIIQMRKQEEEKEEVKEE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0613 389 Gene3D WRKY domain 189 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g0613 389 SMART WRKY_cls 205 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g0613 389 FunFam WRKY transcription factor 57 191 265 - -
Lele21g0613 389 MobiDBLite consensus disorder prediction 94 197 - -
Lele21g0613 389 MobiDBLite consensus disorder prediction 94 149 - -
Lele21g0613 389 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 95 307 IPR044810 GO:0003700
Lele21g0613 389 Pfam WRKY DNA -binding domain 206 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g0613 389 Coils Coil 369 389 - -
Lele21g0613 389 SUPERFAMILY WRKY DNA-binding domain 197 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g0613 389 MobiDBLite consensus disorder prediction 150 176 - -
Lele21g0613 389 ProSiteProfiles WRKY domain profile. 200 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0613 Lele-ChrLele21 4107442 4108967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0613 175 380 WRKY Transcription Factor Family AT2G47260 49.528 3.30e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele21g0613 WRKY 2.7e-27 CL0274