Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0587 ATGAATATGGATGCTTCAGAAATCAGAGGAGGGACCTCCAACATCCAAAACGACGACGATTTGGGCCTCCGTAGAGGCCCTTGGACCCTCGACGAAGACCTCACCCTCATCAATTACATTGACGCACACGGCGAAGGTCGCTGGAACTCCCTCGCTCGATCCGCCGGTCTGAAACGAACTGGTAAGAGCTGCAGATTGAGGTGGCTCAATTATCTCCGGCCGGATGTTCGACGTGGAAACATCACCCTCGAAGAACAGTTCCTGATTCTCGAGCTTCATTCTCGCTGGGGAAACAGATGGTCGAAAATCGCCCAGTACTTGCCGGGAAGGACTGACAACGAGATCAAGAACTACTGGAGAACACGAGTTCAAAAGCACGCCAAGCAGCTCAAATGTGACGTGAACAGCAAGCAATTCAAGGACACCATGCGTTTCCTCTGGATGCCCAGGCTCGCCGAGCGTATTCAAGCTTCCGCCGCCGCCATCTCCGTTTCTCCGCCGGTATCTACCATCGCCTCCGCCACTCCTCCAAACAGCGCTTACAATTACAACAATTTCGAGTTTGGTGGGGGCGCCTCTCAGGTCACTGGAAGCAACTACACGACAGAGAACAGCAGCGCGGCGGCTTCGTCAGAGTCATTCGGGTCTACTCAGGTGTCGCCGATGTCGGACTTGACGGATTATTGCTACGGTGGAGTTCCGGTTGGCAACAATAAGGGTAACCCTAATCTGGATTACTGTCAAACGGGGGATTTGAGCTACTCGGATAGCATCAGCAGCTTGGATATGCAAGCCGTGGAACCAAACAACAGCAACCACCAGTATTGGGCTCAGAGTGCTGGAGGAGGGGACACGTCGGACAATTTCTGGAATGTTGAAAACATGCTGTTTTTACAGCAACAGCTCAGTGACAGCATGTAA 921 0.5266 MNMDASEIRGGTSNIQNDDDLGLRRGPWTLDEDLTLINYIDAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQFLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRFLWMPRLAERIQASAAAISVSPPVSTIASATPPNSAYNYNNFEFGGGASQVTGSNYTTENSSAAASSESFGSTQVSPMSDLTDYCYGGVPVGNNKGNPNLDYCQTGDLSYSDSISSLDMQAVEPNNSNHQYWAQSAGGGDTSDNFWNVENMLFLQQQLSDSM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0587 306 CDD SANT 82 121 IPR001005 -
Lele21g0587 306 CDD SANT 27 72 IPR001005 -
Lele21g0587 306 FunFam MYB transcription factor 82 145 - -
Lele21g0587 306 Gene3D - 81 144 - -
Lele21g0587 306 FunFam Myb transcription factor 25 77 - -
Lele21g0587 306 Gene3D - 22 78 - -
Lele21g0587 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Lele21g0587 306 SMART sant 24 74 IPR001005 -
Lele21g0587 306 SMART sant 77 125 IPR001005 -
Lele21g0587 306 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Lele21g0587 306 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Lele21g0587 306 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Lele21g0587 306 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Lele21g0587 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Lele21g0587 306 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 226 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele21g0587 306 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0587 Lele-ChrLele21 3956412 3957692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0587 21 161 MYB Transcription Factor Family AT1G48000 79.433 6.64e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g0587 Myb_DNA-binding 1e-14 CL0123