Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0581 ATGATTGTGACCAAAGAAATTGTCTGTCAGCCAAGCATCCCTGTGTTGGATGTGGAGTATCATCTTCGCGTAGCACAAGAGCACAACGTCAAGGTGGTTTCACCGAGATCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAATCAATTTCTACTGAAACGTGCCGCTTTGAAACGGCTGAGAGTTGTCCTGAGATAATTAAAGATTCCATTGTAGAGATCTCCTCATCTAAGTTCGTCCCAAATGTTCGATCTGGTAGCCATGTTGATATTGGACCACGCGGATCTATGGATGATGAACACATTCAAATAGATGATCTCGCTTCCCATCTTGGACTAGTGTTCAAGTCTCCAATACCAAGTGCATTTTATGCAGTTTTTGACGGCCATGGAGGGCCCGAGGCAGCCGATTTTGTCAAGAGGAATGCTATGAGACTATTTTTTGAAGATGCTAATCTGCTGCTGTCATATGATACTGATGTATTATTTCTGAAGAAATTGAAGGATTCCCATCGGAAAGCTTTCTTACTTGCAGACCTTGCCCTGTCTAATGAAGCCACTGTTAGTAGTTCCTGTGGGACAACAGCATTGACTGCACTTATACTTGGAAATCATTTACTCATTGCAAATGCTGGCGATTGTCGGGCAGTTCTTTGCAGAAAAGGCGTGGCTGTTGACTTGTCTAAAGATCATAGACCGAGTTATTTACCAGAAAAGAGAAGGGTGGAAGAGTTAGGTGGCTTCATCGATGATGGCTATCTCAATGGTTATCTGTCTGTGACCAGAGCACTTGGGGATTGGGATTTAAAATTTCCACTTGGTTCTGCTTCACCTCTTATTGCTGATCCAGAGGTTCAACAGGTTTCATTGACTGAGGATGATGAGTTTCTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCAAGTCAGGAAGCAGTTAGTTTGGTCCGCCGTGGGTTAAGAAGGCATGATGATCCACAGCAATGTGCTAGAGAGCTAGTCAAGGAAGCACTGCGCTTGAATACATCAGATAATCTCACTGTGATCGTTATAAGGCTGTCCTCCGTTGAAAGCATAGTTGAATCATGTCCACCCCAAAGGCGAAGATTCAGAGCTTGCTCTCTTTCTGAAGAGGCGCGTAACAGATTGAAGAGCTTACTGGAGGGCAATTGA 1182 0.4416 MIVTKEIVCQPSIPVLDVEYHLRVAQEHNVKVVSPRSSVPIFGQVRVSSESISTETCRFETAESCPEIIKDSIVEISSSKFVPNVRSGSHVDIGPRGSMDDEHIQIDDLASHLGLVFKSPIPSAFYAVFDGHGGPEAADFVKRNAMRLFFEDANLLLSYDTDVLFLKKLKDSHRKAFLLADLALSNEATVSSSCGTTALTALILGNHLLIANAGDCRAVLCRKGVAVDLSKDHRPSYLPEKRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGSASPLIADPEVQQVSLTEDDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNLTVIVIRLSSVESIVESCPPQRRRFRACSLSEEARNRLKSLLEGN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0581 393 CDD PP2Cc 85 356 IPR001932 -
Lele21g0581 393 ProSiteProfiles PPM-type phosphatase domain profile. 86 356 IPR001932 -
Lele21g0581 393 SUPERFAMILY PP2C-like 77 357 IPR036457 -
Lele21g0581 393 SMART PP2C_SIG_2 101 356 IPR001932 -
Lele21g0581 393 Gene3D - 71 361 IPR036457 -
Lele21g0581 393 SMART PP2C_4 76 354 IPR001932 -
Lele21g0581 393 PANTHER PROTEIN PHOSPHATASE 2C 82 355 IPR015655 GO:0004722|GO:0006470
Lele21g0581 393 FunFam Probable protein phosphatase 2C 22 71 359 - -
Lele21g0581 393 Pfam Protein phosphatase 2C 96 348 IPR001932 -
Lele21g0581 393 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0581 Lele-ChrLele21 3897814 3899615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0581 1 392 PP2C-type Phosphatase Gene Family AT1G48040 57.468 2.25e-151 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele21g0581 PP2C 8.7e-66 CL0238