Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0574 ATGATGCCCGTCGATGATCAGGAGAACGAGGAATGGAAAACGCTGCAAAACGTAACGTTGAAGGCCATGGAAGCTCTGGCCGTTGCCACAACAGAGTTTGCGCTTCCTGATTCAGATATCAACTGGGACAGTTTTAATCACAAACATCCCTACCCATTTTTTCTTCCTTTGATTTTAGTGGTAACTTTTGCTGGGGGTATCATATTTCCAAGGCTAATGGTACAAGGTCTTCCTGGGACTACATACTGCCGCGGGCCATTTGATGTTGTTCAAATGGTGATTGTCCCGGCTACAGCAGGGATGGTGGCTGGTGCTTGTTCATCTGTTATAACCGCTCCCATAGATACTGTAAAAACACGGCTTCAGGTTATGGACAACTATGGTGGTGAAAGATCATCAGTGTTGAAGGCAACAAAGGCACTCCTGAAGGAAGATGATGGTGGGGGCTACCCTTTAAATGTTGATCTTACAATTTTGTTGAAGTTGTATGCATATCTCTCCATAGAATCCGAAATATGCACTGGGCTGTTTATTGAAGTTCTTCCCTCTGAAATGTTCCATGTATTGCAAATATTTTGGGCTTGTTTGTTCATGCCAAAGAAAAATTGTGGATTTTTCATCAGATTCTCTTTTGAAACGAGTGATTTTAAAGCATTTTATGTCTTTCATTTTATATCTTCTCAACTAGAAGTGGGAACTTTGCACTGCTCCAAGTATATCCAAAGTACATGTGCTACTTCTGGGGAAGGATTATACGAGGGACTGGACTGGCTTTCAAACAACATTGCCAGCAAGGTTCTCCCTTTTCCTTTTCATTTGGTTTATAGCCGCTGGCATGGCTGGCTTTCTTTGCTTTTTGTTTCTTTCCAAAAAGGACATGGGTACGTGGAGAATAAGCGTGAAAGACAAATGGGGAAGAGGCTACTGCTTACAACCACGAACACGACACGTTCTCTTCATGCAGAAAACTCTACCGTCTTTATAATCTCACTTCCTCCGCACTCCTTCTACATCGCAGATGCAGTAGAGTTGAACATCACAAGCCTCTTTATCCGTCGTCTTCTTCTTCTAAGCTTCGTTCAGGAAGAAATGCCAGGCCTCACCATCGGAGACACCGTCCCCAACCTTCAAGTCCAAACAACCCAGGGCAACTTCAAGCTCCACGATTACTTCTCTGGTTCCTGGACCATCCTCTTTTCTCACCCTGGCGACTTCACGCCGGTGTGCACGACGGAGCTTGGGAAGATGGCTCAGTACTCTGAGGAATTCAAGAAGCGAGGAGTGAAGCTGCTGGGTCTGTCCTGTGATGACCTCAATTCCCACAAAGAGTGGATCAAAGACATTGAAGCCTATACTTCAGGTACGAAGGTGGAGTATCCCATCATCTCTGATCCAACAAGAGACATCATCAAGCAACTCAACATGATGGACCCTTCTGAGAAAGACCCCAAGGGCTGCCAGCTCGCCTCCAGGGCTCTTCATATTGTGGGCCCTGATAATACGATAAAGCTGAGTTTTTTGTACCCTGCGACTACTGGGAGGAACATGGACGAGGTGGTGAGGGCGTTGGATTCTCTGCAGAAGGCCGCGAAGTATAAGGTGGCGACCCCGGTCAACTGGAAACCCGGTGAACCGGTAGTGATTTCGCCAAATGTGAATAATGAGGAAGCCAAGGCCATGTTCCCTCAAGGTTTTCAGACGGCGGACCTTCCATCAAAGAAGGAGTATCTGCGTTTCACCCAAGTTGCTTGA 1752 0.4618 MMPVDDQENEEWKTLQNVTLKAMEALAVATTEFALPDSDINWDSFNHKHPYPFFLPLILVVTFAGGIIFPRLMVQGLPGTTYCRGPFDVVQMVIVPATAGMVAGACSSVITAPIDTVKTRLQVMDNYGGERSSVLKATKALLKEDDGGGYPLNVDLTILLKLYAYLSIESEICTGLFIEVLPSEMFHVLQIFWACLFMPKKNCGFFIRFSFETSDFKAFYVFHFISSQLEVGTLHCSKYIQSTCATSGEGLYEGLDWLSNNIASKVLPFPFHLVYSRWHGWLSLLFVSFQKGHGYVENKRERQMGKRLLLTTTNTTRSLHAENSTVFIISLPPHSFYIADAVELNITSLFIRRLLLLSFVQEEMPGLTIGDTVPNLQVQTTQGNFKLHDYFSGSWTILFSHPGDFTPVCTTELGKMAQYSEEFKKRGVKLLGLSCDDLNSHKEWIKDIEAYTSGTKVEYPIISDPTRDIIKQLNMMDPSEKDPKGCQLASRALHIVGPDNTIKLSFLYPATTGRNMDEVVRALDSLQKAAKYKVATPVNWKPGEPVVISPNVNNEEAKAMFPQGFQTADLPSKKEYLRFTQVA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0574 583 Gene3D Antioxidant, Horf6; Chain A, domain2 515 582 - -
Lele21g0574 583 ProSiteProfiles Solute carrier (Solcar) repeat profile. 91 174 IPR018108 -
Lele21g0574 583 CDD PRX_1cys 369 581 IPR045020 GO:0051920|GO:0098869
Lele21g0574 583 Pfam AhpC/TSA family 369 503 IPR000866 GO:0016209|GO:0016491
Lele21g0574 583 PANTHER MCG48959-RELATED 363 582 - -
Lele21g0574 583 Pfam C-terminal domain of 1-Cys peroxiredoxin 525 564 IPR019479 GO:0051920
Lele21g0574 583 Gene3D Glutaredoxin 366 514 - -
Lele21g0574 583 FunFam 1-Cys peroxiredoxin 515 583 - -
Lele21g0574 583 SUPERFAMILY Thioredoxin-like 367 581 IPR036249 -
Lele21g0574 583 FunFam Peroxiredoxin PRX1 367 514 - -
Lele21g0574 583 Gene3D - 220 266 IPR027417 -
Lele21g0574 583 Pfam Mitochondrial carrier protein 97 145 IPR018108 -
Lele21g0574 583 SUPERFAMILY Mitochondrial carrier 94 144 IPR023395 -
Lele21g0574 583 Gene3D Mitochondrial carrier domain 78 150 IPR023395 -
Lele21g0574 583 ProSiteProfiles Thioredoxin domain profile. 367 528 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0574 Lele-ChrLele21 3801291 3810633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0574 91 150 Chloroplast and Mitochondria Gene Families AT5G15640 46.667 1.14e-07 52.0