Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0568 ATGGAGGCTAAATTTCGGGGAAAGAATCAGTATGTCTATGGACCTGTGGTGCCGGAAATGAAAGCGGTTGGAAAGAAGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGACGGAGATCTTTTCGCTGCTAGTCCACTAAATTCAGTTCCATCTGATTGTAGAAACAAGCAGTCTTTCCCAGTTGATGCTGAAATTCCTGCGAAAGCTAATACTTCTAACATTTTATCTTCTAATTGGGATGATGTCAACCCAGAGAAAGGAAAGAGAGAATTGGAAAAAAGGAGGAGAGCTGTTATATCTGAAGGTGATGAGCTGAATGATGAAGCTGGTTGTCTTAATTTAAACCTTGGGGCTCAAATTTACCCTATCATGGAAGGGGATGAAAAAAGTGGAAAGAAGACAAAGATAGTTGGCAGTGGGACTACTTCAAACCGAGCGGTTTGTCAGGTGGAAGATTGTAGGGCCGATCTCAGTAATGCAAAAGATTACCATCGTCGGCATAAGGTTTGTGATATGCATTCCAAAGCCAGCAAAGCACTGGTAGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACACATCCTGATGCTGTCGTTAATGGAGGCTCCCTGAATGATGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCTAATATGCACTCAAATGGCTCAGATTCTACTAGGGACCAAGATATTCTCTCTCATCTGCTAAGGAATCTGGCAAGTGTGGCTGGTACAATCAATGGAAGGAACATAGCCTCGTTATTGGAGGGATCCCAAGGTTTGGTGAATTCTGGGACATCTGGAACTTCCCAAAAAGTGCCTAATCTAAATTCAAATGGCCCCGAACCCATCAAATGTCCTGGTTCTTCCATCAAGACAGATAATGGTCTCAGCAGTCAGGACCCTCCAAAGCCTATGGGACAGTCTGAGACAGTGCCCGCATATGATATGGCGCAAAAATGTTTACCTTCAGGTGATGCTGGGGTTGGGAGTTTAAAATTTCCTTCAGGATCACAGTCTTCAAATGTACCCCAATCAGTTGCAGCAGAGACTACAGTTAGAAGGAACGGTTTAAATCACATTGACCTCAATAACGTATATGATGACATACAAGATGATGCTGAGAACCTTAGGAATTCTCATCCACCTGAGGCATCAGCTATTGGATCTCTTGATCATCCTTCATGGCTACAACTTGACACTCAAAAGTCAAGTCCACCACAGACAAGCAGAAACTCGGATTCAACCTCTTCTCAGTCACCTTCTAGTTCTAGTGGAGAAGCTCAAAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCGAATGATTTTCCTCTTGTTCTTCGATCACAGATTCTCGGCTGGTTATCCCACAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGTATTATATTAACAGTATACATCTGTCTAGAAAAATCTGTTTGGGAGGAGCTCTGCTGTAATTTAGGACTCAGCTTGAAAAAGCTTCTTGCTGCATCAAATGACCCTTTCTGGACGACGGGGTGGGTATATGCAAGAGTGCAGCATTCTGTAGCCTTTCTGTACGATGGTCAGGTTGTATTAGACGTTCCCTTGAGCCTTAGAAGCGCACAACACCGTAGGATTTCATGTATTAAACCACTTGCTGTTTCTTCAATGGCAAGCACTCAATTTGTTGTCAAAGGTGTCAACCTTTTCCATTCTAGCACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGGCACAGTATAGTTGTTGTGACTTGATTGATGATGTTGATACAGCTACTGAACACGATGAGCATCAGTGCCTTAGCTTCTCTTGTACTATACCAAGTGTTACTGGGAGGGGGTTTATTGAGGTGGAAGATCACGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTTGCGGAGCCAGAAATTTGTACAGAGATCTGTAATCTGGAGAGTGTGATTGAGGCAGATGAGATCTGTAAAGATGTACAGATGAGAAGCAAACAAATGGAAGAAAAGACTCGAGCCTTGGATTTCATACACGAAATAGGTTGGCTCCTTCATAGAAGTCACACGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCTGTTCCATTTCAATCGGTTCAAGTGGCTTGTTGACTTCTGCATGGACCGTCATTGGTGTGCTGTGATGAAAAAGCTTCTGGACATTATGTTTGAGGGTACTATTGATGCAGGAGAGCATACCTCTGTCGAGCTTGCGTTGTTAAACTTGGGTCTTCTACATAGAGCTGTGAGGAGAAATTGCAGGCCTATGGTTGAACTACTGTTGAAGTTCGTACCAGTTCAATCTTCAGATGACAACGGTAAGGAGAAACAAGTCGGCAAGCACTCTGACAGATTCTTATTTAAACCCGATAATGTTGGCCCTGCTGGTTTGACTCCCCTTCATGTTGCGGCAAGCATGCATGGCTCGGAGAATGTATTGGATGCATTGACTGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACAGCACGGGTTTGACCCCGGAGGACTATGCATCCATGAGGGGCTACCGCTCATACATTCAACTCATCCAGACAAAAACAAGCAAAAAAATTGATGAAACTCACCACCATGTACTCGACATCCCATCTTCCCTTGTAGATAGCAACACACAGAAGAAGCAACGGTCATTATCGAAAGTTTCAAGCTTGCAAACCGAGAAGATTGAAACGGGGGTGGCAGCTGCGACGACTCCACATCAATGTGGGCTATGCCAGCACAAGCTAGCTTGTCACAGCACGAGGACTGCACTTGTTTATAGACCAGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCCCAAGTCTCCTATGTCTTCCAGCCCTTCAGATGGGAATCATTAGATTATGGCTCAATGTAG 3084 0.4468 MEAKFRGKNQYVYGPVVPEMKAVGKKSLEWNLEDWKWDGDLFAASPLNSVPSDCRNKQSFPVDAEIPAKANTSNILSSNWDDVNPEKGKRELEKRRRAVISEGDELNDEAGCLNLNLGAQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDSTRDQDILSHLLRNLASVAGTINGRNIASLLEGSQGLVNSGTSGTSQKVPNLNSNGPEPIKCPGSSIKTDNGLSSQDPPKPMGQSETVPAYDMAQKCLPSGDAGVGSLKFPSGSQSSNVPQSVAAETTVRRNGLNHIDLNNVYDDIQDDAENLRNSHPPEASAIGSLDHPSWLQLDTQKSSPPQTSRNSDSTSSQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILGWLSHSPTEIESYIRPGCIILTVYICLEKSVWEELCCNLGLSLKKLLAASNDPFWTTGWVYARVQHSVAFLYDGQVVLDVPLSLRSAQHRRISCIKPLAVSSMASTQFVVKGVNLFHSSTRLLCALEGKYLAQYSCCDLIDDVDTATEHDEHQCLSFSCTIPSVTGRGFIEVEDHGLSSCSFPFIVAEPEICTEICNLESVIEADEICKDVQMRSKQMEEKTRALDFIHEIGWLLHRSHTKARLGPMAPVQDLFHFNRFKWLVDFCMDRHWCAVMKKLLDIMFEGTIDAGEHTSVELALLNLGLLHRAVRRNCRPMVELLLKFVPVQSSDDNGKEKQVGKHSDRFLFKPDNVGPAGLTPLHVAASMHGSENVLDALTDDPGMVGIKAWKSARDSTGLTPEDYASMRGYRSYIQLIQTKTSKKIDETHHHVLDIPSSLVDSNTQKKQRSLSKVSSLQTEKIETGVAAATTPHQCGLCQHKLACHSTRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFRWESLDYGSM 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0568 1027 MobiDBLite consensus disorder prediction 369 385 - -
Lele21g0568 1027 MobiDBLite consensus disorder prediction 433 466 - -
Lele21g0568 1027 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Lele21g0568 1027 MobiDBLite consensus disorder prediction 365 385 - -
Lele21g0568 1027 Gene3D - 778 924 IPR036770 -
Lele21g0568 1027 MobiDBLite consensus disorder prediction 299 320 - -
Lele21g0568 1027 MobiDBLite consensus disorder prediction 213 235 - -
Lele21g0568 1027 MobiDBLite consensus disorder prediction 299 347 - -
Lele21g0568 1027 Pfam SBP domain 149 222 IPR004333 GO:0003677
Lele21g0568 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 896 IPR044817 GO:0003677
Lele21g0568 1027 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Lele21g0568 1027 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Lele21g0568 1027 SUPERFAMILY Ankyrin repeat 796 907 IPR036770 -
Lele21g0568 1027 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
Lele21g0568 1027 Coils Coil 89 109 - -
Lele21g0568 1027 MobiDBLite consensus disorder prediction 327 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0568 Lele-ChrLele21 3773318 3778947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0568 1 1026 SBP-box Gene Family AT3G60030 48.698 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele21g0568 SBP 7.9e-29 No_clan