Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0567 ATGGATGCGACAAACGATTGGTATGTGATAAAACCAAGAATCGATGGTTGTGACGGTGGTGAAATGTCGCGAGTTTTTGAAGACGCAGGTCCATTGAATAACCGAAATCTCGCTCTTCAGGATACCGCCTATCATGAATTTCATACTATTTGCCAATTTTCCATCCCGCAGAGGATCATGGGTTGCTTTGGTTGTTGCGAAGACAGTGATGTTCATATACAAGCTGACAATAAAATCTTCATGCAAAACAATACCGCAGGGAGAACTGGCTATTCTGGAAGAGACGCTGTTGCAAGAACCCCTCCCCCCACAGTGCATTTTCAACCTATTGCTGTCCCTTCCCTTTCAATTGATGAATTAAAGTCCGTGACAGATAATTTCGGCACGAAATCCTTCATCGGGGAGGGTGCTTATGGCAAAGTATATCATGCCATATTGAGAAACGGCCGTGCTGTGGCTATAAAAAAGTTGGATTCTAGTAAGCAACCAGAACAAAATTTTCTCGCGCAGGTCTCCATTGTGTCAAGGTTAAGGCATGAAAATGTTATCGAACTAGTTGGTTACTGCGTTGAGGGTCCTTTTCGCGCCCTAGCCTATGAGTATGCTCCTAAAGGATCACTTCATGACATCCTTCATGGACGCAAAGGCGATAAGGATGCACATCCTGGTCCGGTTCTATCTTGGGAACGGAGAGTTAAAATTGCTTTTGGAGCAGCTAAAGGACTGGAATATCTACATGAAAAAGCAGAAACTCGTATCACCCATCGCTACATTAAGTCTAGCAATATACTGCTTTTTGATGATGATGTTTCAAAGATTGCTGATTTCGATTTGTCAAATCAAGCCCCCGATGAAGTGGCTCGTGTCCATTCTACTCGTGTTCTGGGAACCTTCGGTTATTATGCTCCAGAATTCGCAATGACGGGAGATCTCACTATAAAGAGCGACGTTTACAGTTTTGGAGTTATATTGTTGGAACTATTAACGGGGCGTAAGCCTGTTGATCATACACTGCCTCGAGGGCAACAAAGCCTAGTGACTTGGGCAACACCAAAACTGAGTGAAGATAAGGTAAAACAGTGTGTAGATGCCAGATTACAGGACAAGTACCCTCCAAAAGCAGTTGGCAAGATGGCTGCTGTGGCTGCATTGTGTCTGCAATATGAAGCAGGGTTAAGGCCAAACATGATCATTGTAGTTAAAGCTTTACAACCTCTGTTAAATCCTCGTCCTGCTCAGCCAAAGGCAAAGTTTTGA 1257 0.4383 MDATNDWYVIKPRIDGCDGGEMSRVFEDAGPLNNRNLALQDTAYHEFHTICQFSIPQRIMGCFGCCEDSDVHIQADNKIFMQNNTAGRTGYSGRDAVARTPPPTVHFQPIAVPSLSIDELKSVTDNFGTKSFIGEGAYGKVYHAILRNGRAVAIKKLDSSKQPEQNFLAQVSIVSRLRHENVIELVGYCVEGPFRALAYEYAPKGSLHDILHGRKGDKDAHPGPVLSWERRVKIAFGAAKGLEYLHEKAETRITHRYIKSSNILLFDDDVSKIADFDLSNQAPDEVARVHSTRVLGTFGYYAPEFAMTGDLTIKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLQDKYPPKAVGKMAAVAALCLQYEAGLRPNMIIVVKALQPLLNPRPAQPKAKF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0567 418 Gene3D Transferase(Phosphotransferase) domain 1 203 415 - -
Lele21g0567 418 CDD STKc_IRAK 133 406 - -
Lele21g0567 418 SUPERFAMILY Protein kinase-like (PK-like) 102 403 IPR011009 -
Lele21g0567 418 ProSiteProfiles Protein kinase domain profile. 127 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0567 418 FunFam pto-interacting protein 1 203 414 - -
Lele21g0567 418 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 63 412 - -
Lele21g0567 418 Pfam Protein tyrosine and serine/threonine kinase 131 402 IPR001245 GO:0004672|GO:0006468
Lele21g0567 418 Gene3D Phosphorylase Kinase; domain 1 98 201 - -
Lele21g0567 418 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0567 Lele-ChrLele21 3755957 3761039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0567 108 404 Receptor kinase-like Gene Family AT4G02010 48.173 3.72e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele21g0567 PK_Tyr_Ser-Thr 8e-45 CL0016