Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0554 ATGACAAGAGAGACAAGAAGTTCAGCTAGTAATCCTGAAAAAGTTCAGGGAGAGTCAAACAAGAATCAGGGTTCAAAGAAGAAGATTAAGGAAAAGGATGAAACCGCCAACAACACTGTACCTTTTTACAAGCTTTTCTCATTTGCAGATTCTATGGATTATCTGTTGATGCTTGTGGGGACAGTTAGTGCGGCTGCAAATGGAATGGCTATGCCCTTAATGATTCTATTTCTTGGAGATGTAATTGATGCTTTTGGAAGATCCGCAGACACCGAACAAGTTGTCCATGAAGTTTCCAAGGTGTCACTGAAGTTCATATACTTGGCAATTGGTTCCTTTCTTGTGTCATTTCTTCAGGTGACTTGCTGGATGGTCACTGGAGAAAGACAGGCTGCAAGAATAAGAGGTTTATACCTGAAGACAATTCTGAGGCAGGACATCAGTTTCTTTGATAAGGAGACTAACACTGGTGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCATACAGTGTGTGGCAACTTTTTTTGGAGGTTTTATCATAGCATTCATTGAGGGATGGCTTCTAACTCTTGTAATGCTATCTTCTATTCCTCCTATTGTCTTTTCTGGTGCTATGATGAGCATTGTTCTCGCCAAAGCGACATCCCGTGGACAAAAAGCTTATTCTTCTGCTGCAAGTATAGTAGACCAGACAATTGGTTCTATCCGAACAGTTGCATCATTCACAGGGGAGAAGCAATCTATAGCTAAATATGATCATTTCTTGATTAAAGCCTACAGGACTAGTGTGCAAGAGGGACTTGCTTCTGGTTTGGGTTTTGGTTCAACTTTTCTTCTTTTTTTCTTCACTTATGGTTTGGCAGTATGGTATGGTGGGAAAATGGTACTGGAGAAAGGATATACAGGAGGGAAGGTTATGACTGTAATTTTCTCTGTTGTGACAGGCTCCATGTCTCTGGGTCAGGCATCTCCAAGCATGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTCTAAGATGTTTGAAACGATAAAAAGGAAGTCGGACATCGATGCTTACGACACTACTGGCAAGCGGCTGCATGATATACGTGGGGATATAGAAATGAGGGAAGTTTGCTTTAGTTATCCTGCGAGACCGGATGAACTCATATTCAATGGATTTTCTCTGTCATTACCAAGTGGCACTACAACAGCTTTGGTAGGACAAAGTGGGAGTGGAAAATCAACAGTTATTAGTCTGATAGAAAGATTTTATGATCCACAAGCTGGTGAGGTTCTCATTGATGGTATCAATATCAAAGAATTGCAGCTAAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCAGTTTTGTTTACTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGATGGTGCAACAGATGAAGAAATCACAGAAGCAGCAGAGCTTGCTTATGCTGCAAAATTCATAGATAAACTTCCTCAGGGGTTAGACACAATGGTTGGTGAACATGGAACTCAGCTGTCTGGGGGTCAAAAGCAGAGGGTAGCCATAGCAAGAGCAATATTGAAAGACCCAAGAATTCTTCTTCTTGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATTGTACAGGAGGCACTGGACAGAATAATGATAAACAGAACCACTGTTATTGTAGCACATCGCTTGAGTACTGTAAGGAATGCTGATATTATTGCCGTTATTCAGCAAGGAAAAATAGTAGACAAAGGTTCACATGCTGAGCTCACTAAGGTCCCCGATGGAGCCTATAGTCAACTCATTAGATTGCAGGAAACAAAGGAGTCCGAGAATATTAATGCCAATGACACAGATAAGCCAGAAAAAATAATGAATTCTGAAAGGCAATCCAGCCAACGACTTTCTTCCTTAAAATCTGTAAGTCGAGAGTCATCTGGACTTGGAAGAAGCAGTCGTCGTTCATTCTCAGTGTCTCCAACAAATGGACTCTTTGAAACAGAAGTTGCAGAACCTAAAGCTCCTAGTTCAAAAGATTCCCCAACACCTCCAGAAGTGCCACTCTACCGCCTGGCTTATCTGAACAAACCTGAGATTCCAGTTTTGTTTATAGGGACTCTGGTAGCTGTGGCAAATTCAGCAATATTCCCAGCTTTCGGGCTACTGATCTCCAAAATGATAAACACTTTCTATGAGCCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCATTGATATTTGTTGCCCTTGGTGTGGTATCCTTCTTAGTAATTCCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAAGTTGATAAGAAGGGTCCGGCTAATGTGTTTTGAGAAAATAATCCATATGGAAGTAAGTTGGTTTGATGAAGCTGAGCATACAAGTGGTGTCCTTGGAGCCAGGCTCTTTACTGATGCAGCTTCCATCCGAGCTTTGGTCGGAGATGCACTTGTTTTGCTGGTTCAAAATATTGGTACTGCAATTATTGGTTTGGCCATTGCTTTGGAGGCATGCTGGCAGCTTGCTCTTATAATTCTTGTTATGGTACCCTTATTAGTACTCAATGGATACGCACAGTTCAAGTTCATAGAAGGATTCAGCACAGACGCTAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCAGTAGGGAGTATTAGAACAATTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAATTATACCATAGAAGATGTGAAGGGCCAATTAAAACAGGCATAAGGAGAGGGATAATAAGTGGAACTGGATTTGGTTTATCATTCTTCTTGCTGTTTTCTGTCTATGCATGCAGTTTCTATGCTGGAGCTCGACTCGTTCAAGATGGCAAATCATCATTCTCAGATGTTTTTCGTGTCTTCTTTGCTCTCATTGTAACAGCATTAGGAATCTCCCAATTTAGCTCAATGGCTCCTGATTCAAGTAAAGCAAAGAGTTCTGTTGGTTCTATATTTGTTATTCTTGATGGGAAATCAAAAGTAGACCCAAGTGATGACTCTGGAATCACATTGGAACACTTAATGGGAGAAATCGAGTTTCGCCATGTCAGTTTCAAGTATCCAACCAGACCTGATTTTCAAGTATTCAGAGATCTTTCCTTGAGCATTCGTTCAGGAGAGGTAAATATTTTGCTGAACATACATAAACTAACATTTGCCGTTATACTGTTATTCCAGTTGGAAGAAAATAACACTTTGATTAAACTGTTGGTGAAACAACAGACAGTTGCTCTGGTTGGAGAAAGTGGAAGTGGGAAATCAACTGTCATCTCGTTGTTGCAGAGATTTTATGACCCTGATTCAGGTCAAATTACATTGGATGGGATAGAAATCCAAAAGCTACAAGTAAAATGGTTAAGACAGCAAATGGGTTTGGTGAGTCAAGAGCCTATGTTATTTAATGACACAATCAGAGACAATATTGCATATGGAAAGGGAGGGAATGCAACAGAGGCTGAAATTATTGCTGCAGCAGAACTGGCAAATGCCCACAAGTTCATTTCTAGTTTGCAGCAGGGGTATGACACGATAGTAGGAGAGCGAGGAATTCAGTTATCCGGGGGACAGAAGCAGCGGGTGGCTATTGCACGAGCCATAGTGAAGAATCCGAAAATATTACTTCTAGATGAAGCTACCAGTGCCCTAGATGCAGAATCTGAGAAAGTGGTGCAGGATGCATTGGATCAAATTATGGTGGAAAGAACCACAGTAGTAGTGGCTCATAGGTTATCCACAGTTAAGAATGCAGATTTGATTGTAGCAATTAAGAATGGAGTCATAGAAGAGGAGGGAAAACATGAAACTTTGCTCAACAAAGGTGGTGCCTATGCTTCCTTAGTAGCATTGCACACGAGTTCTTCCATAAAACAACTCAATTGA 3957 0.4119 MTRETRSSASNPEKVQGESNKNQGSKKKIKEKDETANNTVPFYKLFSFADSMDYLLMLVGTVSAAANGMAMPLMILFLGDVIDAFGRSADTEQVVHEVSKVSLKFIYLAIGSFLVSFLQVTCWMVTGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQCVATFFGGFIIAFIEGWLLTLVMLSSIPPIVFSGAMMSIVLAKATSRGQKAYSSAASIVDQTIGSIRTVASFTGEKQSIAKYDHFLIKAYRTSVQEGLASGLGFGSTFLLFFFTYGLAVWYGGKMVLEKGYTGGKVMTVIFSVVTGSMSLGQASPSMSAFAAGQAAASKMFETIKRKSDIDAYDTTGKRLHDIRGDIEMREVCFSYPARPDELIFNGFSLSLPSGTTTALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINIKELQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEITEAAELAYAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTVRNADIIAVIQQGKIVDKGSHAELTKVPDGAYSQLIRLQETKESENINANDTDKPEKIMNSERQSSQRLSSLKSVSRESSGLGRSSRRSFSVSPTNGLFETEVAEPKAPSSKDSPTPPEVPLYRLAYLNKPEIPVLFIGTLVAVANSAIFPAFGLLISKMINTFYEPADKLSKDSKFWALIFVALGVVSFLVIPAKFYFFAVAGGKLIRRVRLMCFEKIIHMEVSWFDEAEHTSGVLGARLFTDAASIRALVGDALVLLVQNIGTAIIGLAIALEACWQLALIILVMVPLLVLNGYAQFKFIEGFSTDAKKLYEEASQVANDAVGSIRTIASFCAEEKVMELYHRRCEGPIKTGIRRGIISGTGFGLSFFLLFSVYACSFYAGARLVQDGKSSFSDVFRVFFALIVTALGISQFSSMAPDSSKAKSSVGSIFVILDGKSKVDPSDDSGITLEHLMGEIEFRHVSFKYPTRPDFQVFRDLSLSIRSGEVNILLNIHKLTFAVILLFQLEENNTLIKLLVKQQTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGIEIQKLQVKWLRQQMGLVSQEPMLFNDTIRDNIAYGKGGNATEAEIIAAAELANAHKFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDQIMVERTTVVVAHRLSTVKNADLIVAIKNGVIEEEGKHETLLNKGGAYASLVALHTSSSIKQLN 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0554 1318 ProSitePatterns ABC transporters family signature. 1211 1225 IPR017871 GO:0005524|GO:0016887
Lele21g0554 1318 Gene3D - 1098 1310 IPR027417 -
Lele21g0554 1318 Gene3D - 1027 1067 IPR027417 -
Lele21g0554 1318 Gene3D - 370 619 IPR027417 -
Lele21g0554 1318 PANTHER ABC TRANSPORTER B FAMILY 18 621 - -
Lele21g0554 1318 SUPERFAMILY ABC transporter transmembrane region 703 1017 IPR036640 GO:0005524|GO:0016020
Lele21g0554 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1098 1308 IPR027417 -
Lele21g0554 1318 FunFam ABC transporter B family member 1 370 619 - -
Lele21g0554 1318 FunFam ABC transporter B family member 1 1088 1310 - -
Lele21g0554 1318 ProSitePatterns ABC transporters family signature. 519 533 IPR017871 GO:0005524|GO:0016887
Lele21g0554 1318 CDD ABC_MTABC3_MDL1_MDL2 1037 1306 - -
Lele21g0554 1318 CDD ABC_6TM_Pgp_ABCB1_D2_like 705 1020 - -
Lele21g0554 1318 MobiDBLite consensus disorder prediction 623 640 - -
Lele21g0554 1318 MobiDBLite consensus disorder prediction 641 672 - -
Lele21g0554 1318 FunFam ABC transporter B family member 9 44 376 - -
Lele21g0554 1318 SUPERFAMILY ABC transporter transmembrane region 44 360 IPR036640 GO:0005524|GO:0016020
Lele21g0554 1318 MobiDBLite consensus disorder prediction 1 19 - -
Lele21g0554 1318 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 345 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele21g0554 1318 MobiDBLite consensus disorder prediction 621 672 - -
Lele21g0554 1318 FunFam ABC transporter B family member 1 695 1003 - -
Lele21g0554 1318 Gene3D ABC transporter type 1, transmembrane domain 44 636 IPR036640 GO:0005524|GO:0016020
Lele21g0554 1318 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1037 1308 IPR003439 GO:0005524
Lele21g0554 1318 Pfam ABC transporter transmembrane region 57 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele21g0554 1318 Pfam ABC transporter transmembrane region 715 988 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele21g0554 1318 CDD ABC_6TM_Pgp_ABCB1_D1_like 57 341 - -
Lele21g0554 1318 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1002 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele21g0554 1318 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 616 IPR003439 GO:0005524
Lele21g0554 1318 Gene3D ABC transporter type 1, transmembrane domain 1005 1026 IPR036640 GO:0005524|GO:0016020
Lele21g0554 1318 Gene3D ABC transporter type 1, transmembrane domain 697 1004 IPR036640 GO:0005524|GO:0016020
Lele21g0554 1318 Pfam ABC transporter 1098 1239 IPR003439 GO:0005524
Lele21g0554 1318 CDD ABC_MTABC3_MDL1_MDL2 380 618 - -
Lele21g0554 1318 Pfam ABC transporter 399 547 IPR003439 GO:0005524
Lele21g0554 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 618 IPR027417 -
Lele21g0554 1318 SMART AAA_5 407 599 IPR003593 -
Lele21g0554 1318 SMART AAA_5 1098 1292 IPR003593 -
Lele21g0554 1318 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0554 Lele-ChrLele21 3662618 3669105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0554 26 626 Calmodulin-binding Proteins AT2G36910 36.589 7.95e-113 383