Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0539 ATGGTAAACTATCAACATGTTGGACCTGTGCTAGATGGCAAGCATGTAAGCATTAAGAACAGCTTAAGCTTAGGATCTGGGAAGAACATGACCCTGCATTGCCAATCTAAAGATAATGATCTGGGTGAACATATCATACCAGATGGAGACGAATTTGGCTGGGACTTCAATGGCAATGTGACTGGTACCACACTGTTTTTCTGTGATATGGAGTGGGGAAGTGTTCAGCAGTACCATTTTGATGCTTATGAATTTGGCAAAGACTTTTTCAGGAACGGATGTGCATGGCTCATATCAGCTGAAGGCATCTATGGTTTAAATGGACAAACGGGGTACTGGGAATTCATATACAACTGGCCTACAAGTTGA 369 0.4228 MVNYQHVGPVLDGKHVSIKNSLSLGSGKNMTLHCQSKDNDLGEHIIPDGDEFGWDFNGNVTGTTLFFCDMEWGSVQQYHFDAYEFGKDFFRNGCAWLISAEGIYGLNGQTGYWEFIYNWPTS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0539 122 Pfam Plant self-incompatibility protein S1 15 119 IPR010264 -
Lele21g0539 122 PANTHER - 12 107 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0539 Lele-ChrLele21 3581706 3582564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0539 24 119 Carbohydrate Esterase AT3G16970 29.703 1.32e-08 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0539 21 3581706 3582564 Lele23g1507 23 19538923 19539288 hybridization
Lele21g0539 21 3581706 3582564 Lele24g0539 24 3570483 3571519 hybridization