Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0537 ATGCAGTGCACTGACTACCAGGTGCAGCGGTTTCCTGAAAGCTTCTTCAAGATACCAAAGATTTGCAAATCCGGTGTTGTTGGGTTGAAATCTGCGGGAGCATTCGGATCGATCTGTTCGATTGTCTTCCAGATGGAGGGAAAGCTTGACTCTGATGATGGCTTGAGGCCCTTGACAGAGCAAGGAGTTGTAGGAGAGAACGACCAAGACTTGGTGGTTCCAGAATCTTCTCCTCTCACTACGAATTCTGACAAAAATGTTGATGGTGATGCTTGCAATGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGGAAAGAAGTATCTCTCTGCAAACAGGTCAATGCCAGCATCTGGACCAACTCAGCTCACCATCTTCTTTAATGGGAATGTTTATGTCTATGATGGAATTCCTGCAGAGAAGGTGCATGAGATAATATCTATTGCTGCTTCTGCCGCTAAATCTGCTGACATGAAGAGTGGAATACAATCCTCCTTTACGTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACTCCTAATAATGTGGCTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAACGCTTTCTTGAGAAGCGACGAGATAGGCTGGGAAGCAGATCCCCTTATGCTTCTCCGGCAAGAACTAAAGTGTCTGAAAATACAGAGAACAGTTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTCCAAACGCTCAGAGGAGGAGATTCAACCTAGTATCACTGCCTCTTAA 819 0.4603 MQCTDYQVQRFPESFFKIPKICKSGVVGLKSAGAFGSICSIVFQMEGKLDSDDGLRPLTEQGVVGENDQDLVVPESSPLTTNSDKNVDGDACNGEAVEESAGDLLGKKYLSANRSMPASGPTQLTIFFNGNVYVYDGIPAEKVHEIISIAASAAKSADMKSGIQSSFTSPIPTRPSSPQGTPNNVASPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRSPYASPARTKVSENTENSCSADNAPDLVSSKRSEEEIQPSITAS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0537 272 Pfam tify domain 119 151 IPR010399 -
Lele21g0537 272 Pfam Jas motif 207 231 IPR018467 -
Lele21g0537 272 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 86 244 IPR040390 -
Lele21g0537 272 MobiDBLite consensus disorder prediction 159 189 - -
Lele21g0537 272 SMART tify_2 117 152 IPR010399 -
Lele21g0537 272 MobiDBLite consensus disorder prediction 220 272 - -
Lele21g0537 272 MobiDBLite consensus disorder prediction 159 186 - -
Lele21g0537 272 MobiDBLite consensus disorder prediction 233 255 - -
Lele21g0537 272 ProSiteProfiles Tify domain profile. 117 152 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0537 Lele-ChrLele21 3571091 3576023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0537 88 231 Tify Gene Family AT5G20900 45.333 7.46e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele21g0537 tify 5.6e-15 No_clan