Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0531 ATGCATATAGTCACCGCCGACACTCGCAAATCAGGCACAAACCTCAGACCTCAGTGTTCTTCTCAAACACATATCACTGTAGCAGAGACACTTATGGCCATTTCTTCTTCAACCAAAATGGTGCCTGGATTCTGGGTGATGATGCTGATTCTGGGTGTGTTGACGACCACTGTTAGTGATGCTCGTGGTGGCGGTGATCTTAAGGGGTTAGGATGCTTGAAGGTTCCGTCTTCAGATTTCAGAAACTCTGTTCAAGGAGTCATGGGTGTTTTGCAGCATGTTATCTCTATCATGAATAGGTTTCCCAATGGACGAGATTTTCGTCTCTCCAATGCCATTTCCGACTGCATGGACTTGCTCGATTTGTCTTCTGATGCTCTCCAGTTGTCTGCCTCTGCTACTGAGACTCCAACGGGCCATAGAAACGGAACGGGGAGCTTGGGCTCTGATCTGAGAACATGGCTGAGTGCTGCACTTGCAAATCCACAGACATGCATGGAAGGGTTCGAAGGCATCAATAGCTTTATAGATAATATGGTGTCATCTCTTCTGAGCCAAATGATCTCATCGATCCAACAACTCCTAACACAGGTTCACCATGTTCCGGATGAGTTCCCTACAACTACATCTACAAGCAAGGTACGGCTGCCTTCATGGATCAAACCAAGGGACCAGAAGCTTCTACAATCAAATAAGATTAATGCGGATGTTGTAGTAGCAGCAGATGGAACTGGGACTTTCACTAAAGTATCAGATGCAATCGAAGCAGCTCCTGATTATAGCATCAAACGTTTTGTAATATACGTAAAGAGGGGTCTGTACAAAGAGAATGTGGATATCAAGAAGAAGAAATGGAACATCATGATGATTGGTGATGGCATGGATGCCACTGTTATCTCCGGTAATCGGAACTTCAACCAGGGTTGGACAACATTCAGAACGGCTACTTTCAGCGTTAGCGCAAGATCATTCATGGCACGAGACATTACCTTCCAGAACACGGCAGGTCCACAGAATCACCAAGCAGTGGCACTGAGATCAGACTCGGATCTATCAGTGTTCTACCGCTGTGGCATCTATGGCTACCAAGACAGCCTCTTCACACACACAATGCGACAATTCTACAGAGAATGTAGAATAAAAGGCACGGTGGATTTCATCTTCGGAGATGCCACCGCAGTGTTCCAAAAGTGCCAGATTATCGCCAAAAGAGGTCTTCCAGGTCAGAAAAACGTAATCACAGCTCAAGGAAGAAAAGACCCCCACGAACCAACTGGATTCTCCCTCCAATTCTGCAAAATCACTGCAGATTCCGACCTTCTTCCTTTCGTGGGAGCAACCGAAACATACCTGGGGAGGCCGTGGAGGGCATATTCTCGAACAGTTTATATGCAAACTTACATGAGCAACTTGGTGAATCGCCGAGGGTGGCTCGAGTGGAATGGCAATGATTCTTCGTTGGACACACTGTTCTATGCGGAGTACATGAACGGTGGCCCAGGGGCTGCTCTGGAGAACCGAGTGAAATGGCCAGGGTTTCATGTGTTGAAGGACGCGAAGGAAGCTTATCCCTTCACGGTGGCTGATTTTATTGATGGGAATTTATGGCTTCCTCACACGGGTGTCATGTACACAGCTGGTTTAAACGCTTGA 1653 0.4694 MHIVTADTRKSGTNLRPQCSSQTHITVAETLMAISSSTKMVPGFWVMMLILGVLTTTVSDARGGGDLKGLGCLKVPSSDFRNSVQGVMGVLQHVISIMNRFPNGRDFRLSNAISDCMDLLDLSSDALQLSASATETPTGHRNGTGSLGSDLRTWLSAALANPQTCMEGFEGINSFIDNMVSSLLSQMISSIQQLLTQVHHVPDEFPTTTSTSKVRLPSWIKPRDQKLLQSNKINADVVVAADGTGTFTKVSDAIEAAPDYSIKRFVIYVKRGLYKENVDIKKKKWNIMMIGDGMDATVISGNRNFNQGWTTFRTATFSVSARSFMARDITFQNTAGPQNHQAVALRSDSDLSVFYRCGIYGYQDSLFTHTMRQFYRECRIKGTVDFIFGDATAVFQKCQIIAKRGLPGQKNVITAQGRKDPHEPTGFSLQFCKITADSDLLPFVGATETYLGRPWRAYSRTVYMQTYMSNLVNRRGWLEWNGNDSSLDTLFYAEYMNGGPGAALENRVKWPGFHVLKDAKEAYPFTVADFIDGNLWLPHTGVMYTAGLNA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0531 550 Gene3D - 230 548 IPR012334 -
Lele21g0531 550 FunFam Pectinesterase 230 548 - -
Lele21g0531 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 90 182 IPR035513 -
Lele21g0531 550 CDD PMEI-like_4 71 199 - -
Lele21g0531 550 SMART PMEI_2 75 194 IPR006501 GO:0004857
Lele21g0531 550 SUPERFAMILY Pectin lyase-like 234 547 IPR011050 -
Lele21g0531 550 Pfam Pectinesterase 236 534 IPR000070 GO:0030599|GO:0042545
Lele21g0531 550 Pfam Plant invertase/pectin methylesterase inhibitor 108 189 IPR006501 GO:0004857
Lele21g0531 550 ProSitePatterns Pectinesterase signature 2. 380 389 IPR033131 -
Lele21g0531 550 PANTHER PECTINESTERASE 92 538 - -
Lele21g0531 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0531 Lele-ChrLele21 3517591 3519948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0531 39 548 Carbohydrate Esterase AT3G43270 57.198 0.0 625