Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0530 ATGGCTTCCTCGTCCACTCTCAAACTCTTCCTCCTCCTTCTCTTCCCAATCTTCCTCTCTGCTGCAACAACACTGCACCCAAATCTCACTTCCATAAGATCTTTCTGCAGAACCACGCCATACCCAGAACCTTGCTTCGATTCTTTGAAGCTCGGCATTTCTATTAACATAAGCCCGAACATCCTCACCTACCTGCTTCAGTCTCTGCAAGTTGCCATCTCCGAAGCCACCCAACTCTCTGATCTATTCCACAATGCCGGAGGCGGCGGCGGTTCTGGTTCTACTAACCTCGTGGAGAAGCAGAGAGGCTCAATCCAAGACTGTAGAGAGCTTCATCTCTCAACCTTGACTTCCCTCAAAAGATCGCTCTCCAGGGTTCGTAATTCTCCCACTTCTTCCAGGAAGCTCGCCGATGCCAGAGCCTACCTCAGCGCCGCCGTCACCAACAAGAACACTTGCTTGGAAGGCCTCGACTCTGCTACAGGCTCCCTTAAGCCTCTTCTCGTGGACTCTACCATCAAAGCTTACAAACATGTCAGCAACTCTCTCTCCATGCTCCCTAAACCAGGTGATCCAATCGATCTCACACACAGAGAATATATATATAGTTTTCTAAGGTCAATTATTCTGTATCATTATCACTGTGCATCACCAGGATCCAGAGGCCATAAGAATAGGCGGCGTTTGCTGGGAGCTCCGGCGTGGCTGAAGAAGAGAGACCGTCGGATCTTGGATGGGGAAGAATACAGCCCAGATGAGATGATTGTGGTGGCGGTGGATGGAACTGGGAACTTCAGCACCATTAATGAAGCTTTGAACTTTGCTCCGAATAATAGCTTGTACAGGACAGTGATCTATGTGAAAGCTGGGGTTTACGACGAAAATGTGGAGATCCCAAGTTACAAGACTAACGTTGTTCTCCTCGGAGATGGAAGCGACGTCACTCTCATTACTGGTGACAGAAGTGTGGGCGGTGGGTGGACCACCTTCAGATCTGCAACTCTAGCTGTGTCCGGTGATGGCTTTCTGGCACGAGACATAGCGATAGAGAACAGTGCAGGCCCGGAGAATCACCAAGCGGTGGCGTTGAGAGTAAACGCAGACTTAACGGCGCTATACAGATGCGCCGTTTATGGCTACCAAGACACTCTCTACGTCCATTCCTTCCGACAGTTCTACAGAGAATGCGACATATACGGCACAATAGACTTCATCTTCGGTAACGCCGCCGCCGTTGTCCAAGCATGCGACATCGTTTCGAGAAAGCCAATGCCTCACCAGTTCACCGTCATCACGGCTCAATCCCGAGACTCACCGGAAGAGGACACCGGAATCTCAATCCAGAATTGCTCCGTCATAGCCACCGAAGATCTCTATACTAACTCTAGCAGCTTCAAGAGCTACCTCGGACGCCCATGGAGGCCTTATTCTCGGACGGTGTTCCTTGAGTCTTACATTGATGACTTCGTGGACCCAGAGGGGTGGACGGAGTGGTCTAATTCCGATGGCGATGATTCGGAGAGTTTGTACTACGGAGAGTACCAGAATTATGGGCCGGGTTCGGGTACGGGTGGTAGGGTGAATTGGGTTGGGTATCATGTGATGGGGTATGAGGAAGCATATAATTTTACGGTTTCTCAGTTCATTATGGGTGATGCATGGCTTCAGTCCACTTCATTCCCTTATGATGCTGGGATTTGA 1701 0.5015 MASSSTLKLFLLLLFPIFLSAATTLHPNLTSIRSFCRTTPYPEPCFDSLKLGISINISPNILTYLLQSLQVAISEATQLSDLFHNAGGGGGSGSTNLVEKQRGSIQDCRELHLSTLTSLKRSLSRVRNSPTSSRKLADARAYLSAAVTNKNTCLEGLDSATGSLKPLLVDSTIKAYKHVSNSLSMLPKPGDPIDLTHREYIYSFLRSIILYHYHCASPGSRGHKNRRRLLGAPAWLKKRDRRILDGEEYSPDEMIVVAVDGTGNFSTINEALNFAPNNSLYRTVIYVKAGVYDENVEIPSYKTNVVLLGDGSDVTLITGDRSVGGGWTTFRSATLAVSGDGFLARDIAIENSAGPENHQAVALRVNADLTALYRCAVYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAAVVQACDIVSRKPMPHQFTVITAQSRDSPEEDTGISIQNCSVIATEDLYTNSSSFKSYLGRPWRPYSRTVFLESYIDDFVDPEGWTEWSNSDGDDSESLYYGEYQNYGPGSGTGGRVNWVGYHVMGYEEAYNFTVSQFIMGDAWLQSTSFPYDAGI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0530 566 Pfam Plant invertase/pectin methylesterase inhibitor 31 185 IPR006501 GO:0004857
Lele21g0530 566 CDD PMEI-like_3 34 189 - -
Lele21g0530 566 Pfam Pectinesterase 255 552 IPR000070 GO:0030599|GO:0042545
Lele21g0530 566 Gene3D - 250 566 IPR012334 -
Lele21g0530 566 ProSitePatterns Pectinesterase signature 1. 279 298 IPR018040 -
Lele21g0530 566 FunFam Pectinesterase 28 188 - -
Lele21g0530 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
Lele21g0530 566 SUPERFAMILY Pectin lyase-like 252 564 IPR011050 -
Lele21g0530 566 PANTHER PECTINESTERASE 18 556 - -
Lele21g0530 566 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lele21g0530 566 FunFam Pectinesterase 248 566 - -
Lele21g0530 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 188 IPR035513 -
Lele21g0530 566 SMART PMEI_2 27 185 IPR006501 GO:0004857
Lele21g0530 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0530 Lele-ChrLele21 3510348 3512906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0530 24 566 Carbohydrate Esterase AT2G26440 63.570 0.0 705