Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0527 ATGATGTTCAATGCTCTGGCTCCTCCAAAAAAATCTCGTCTCCTTGCCATTCTCAGTGGTGGAAATTCATGTGACAATAAACAAAAGCGGAAACAAGATGATTCTCAGGATCAATCTCCATACCCCATTCCGGAGCTTACTTCATCCGGGCGTCTTGAGGTTAATGTTTTGATCAAACCAACTGCTGATGAACTTCATCGAGTTTTTGAAGCATTGGAGCCAAATTTTGTTTACCTGCAAGGCGAGCAGCTAGAAGATAATGAACAAATTGGGTCCCTATTATGGGAAGATGTTGATCTGTCTAGCCCAGAAGCCTTATATGGATTATTTTCTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAAGGAGAAAATTTGGCAGAGGCTCTCCATTCTAAGGGAATTCCGTACACAATATATTGGAAAAGTGAATTTTCAAAGTATGCTGCATCACATTTTCGTCAAGCTTTTTTCTCAGTGGCACAAAGTACCTCCAGCCACACATGGGATGCCTTCCAGCTTGCTCTCGCTTCTTTCAGATTATACTGTGTACAAAACAATGTCTCACCTTCAAATACCATGAAGAGCAGAAGCAGGCTTGAGCCACAAATGTTTGGTGACCCTCCTAACATTGATATTGCTCCATTTGAAGCGGACATGAATGGGGAAGAAAACTCAACTGAGACGATTTCCGCGCTGAAGATTTATGATGATGATGTGAACATGAGATTTCTTGTGTGTGGAGTTCCCTGCATGCTGAATACTTGCTTATTGGAATCGTTGGAGGAAGGACTCAATGCTCTCCTGTGTACAGAAATACGGGGATGTAAACTTCACAACCGGACAAGTGCTCCACCACCTCCTCTTCAGGCAGGGACATTCTCACGTGGTGTGGTGACCATGCGTTGTGATATATCCACGTGTAGTTCTGCTCATATATCACTCTTGGTGTCTGGTAGTGCTGATACATGCTTTAATGATCAGATTTTGGAGAATCATATAAAAAAGGAGCTGATTGAGAAGAGTCAGCTAGTTCAGGCATCAACTAATTGTGAACAAAGCAACTTACCTTCCTCTGAGCCTCGAAGGTCAACCTCAACAGCCTGTGGGGCTAGTGTATTTGAAGTTTGCATGCGGGTTCCTACATGGGCTTCACTGGTTCTGAGACAGCTTGCACCAGAAGTGTCGTTCCGCAGCCTAGTCATGCTAGGAGTTGCCAGTATTCAGGGATTGCCTGTGGCATCATTTAAGAAAGTTGATGCTGAACGTCTCCTTTACTTTTGTTCAAGGCAGTCAGAAAAAAATTGCTTTAATGACCCCATTTCTTTTGGGCATCCTAGTTGGCTGGTTCCTCCAGTGCCTACTCGAAAAAGATCAGAGCCTTTCTCTGGAATAAAGTCTGTCAATTCTAGTAGCCTTCAAGTCAGTGATAGTGGTAACAATAGACAGAAATTGAACATTGCAGCAATGAGGCCAATCCCTCGCTCACATTGTCAGAAGATTCGACCTTTTTCTGGATTGTCCGAGGGGGAAAGGCTTGATGGAGAACGTGGAAAATCAAATCTGTCAATGGTTCCAATAAAGCATAATGGTGTTGGCTCTAATCCAATCACAAATAGGAAATTTTCATCAACTTGCTGTCAGGCTCAGCAGATTGTTACATTAAATCCACTACCCATGAAGAAGCATGGTTGTGACAGAGCTCCAATACGGGCTTGTTCAGAGGAGGAATTCTTGAAGGATGTAATGCAGTTTCTTATCCTTCGTGGGCATTCTCGGCTAATTCCACAAGGTGGTCTTTCTGAATTCCCTGAAGCCATTCTGAATGCTAAACGCCTCGATCTTTTTAACTTGTACAGAGAGGTGGTATCTAGAGGAGGGTTTCATGTTGGGAATGGCATCAATTGGAAAGGACAGGTTTTCTCAAAGATGCGGAATCACACTTTGACAAATAGAATGACAGGTGTTGGCAATACACTTAAAAGACATTATGAAACTTATCTTCTAGAATATGAACTGGCTCATGATGACGTAGATGGAGAGTGCTGCTTGTTGTGCCACAGTAGTGCAGCTGGTGATTGGGTGAATTGTGGGATATGCGGTGAGTGGGCTCACTTTGGCTGTGATAGGCGTCAAGGACTTGGTGCATTTAAGGACTACGCTAAAACTGATGGGCTAGAGTACGTTTGCCCACATTGCAGCATCTCAAATTTCAGGAAGAAATCTCAGAAAACTTCAAACGGATATTAA 2256 0.43 MMFNALAPPKKSRLLAILSGGNSCDNKQKRKQDDSQDQSPYPIPELTSSGRLEVNVLIKPTADELHRVFEALEPNFVYLQGEQLEDNEQIGSLLWEDVDLSSPEALYGLFSSKLPNTVYLETPKGENLAEALHSKGIPYTIYWKSEFSKYAASHFRQAFFSVAQSTSSHTWDAFQLALASFRLYCVQNNVSPSNTMKSRSRLEPQMFGDPPNIDIAPFEADMNGEENSTETISALKIYDDDVNMRFLVCGVPCMLNTCLLESLEEGLNALLCTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQILENHIKKELIEKSQLVQASTNCEQSNLPSSEPRRSTSTACGASVFEVCMRVPTWASLVLRQLAPEVSFRSLVMLGVASIQGLPVASFKKVDAERLLYFCSRQSEKNCFNDPISFGHPSWLVPPVPTRKRSEPFSGIKSVNSSSLQVSDSGNNRQKLNIAAMRPIPRSHCQKIRPFSGLSEGERLDGERGKSNLSMVPIKHNGVGSNPITNRKFSSTCCQAQQIVTLNPLPMKKHGCDRAPIRACSEEEFLKDVMQFLILRGHSRLIPQGGLSEFPEAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSISNFRKKSQKTSNGY 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0527 751 CDD ARID 576 674 - -
Lele21g0527 751 CDD PHD_ARID4_like 684 735 - -
Lele21g0527 751 Pfam ARID/BRIGHT DNA binding domain 577 674 IPR001606 GO:0003677
Lele21g0527 751 SUPERFAMILY FYVE/PHD zinc finger 670 738 IPR011011 -
Lele21g0527 751 MobiDBLite consensus disorder prediction 22 46 - -
Lele21g0527 751 SMART ARID_2 571 674 - -
Lele21g0527 751 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 10 751 IPR042293 -
Lele21g0527 751 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 678 740 IPR013083 -
Lele21g0527 751 SUPERFAMILY ARID-like 575 689 IPR036431 GO:0003677
Lele21g0527 751 Gene3D - 571 677 IPR036431 GO:0003677
Lele21g0527 751 ProSiteProfiles ARID domain profile. 574 678 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0527 Lele-ChrLele21 3483028 3490012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0527 11 750 ARID Transcription Factor Family AT3G43240 63.073 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lele21g0527 ARID 9.5e-14 CL0123