Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0521 ATGGGGAGAGAAAGAGAGGCGTCGAAGCAGCAGGTGGGATACGCGGAGCAGCTTGTCGCCGTTAATCGCTACAATCCTGACATCCTTCCCGATCTCGAAAACCATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCTCAGATTGTGGCCCGCATATTAGTTAAGGCCCTCATGGCAATGCCAGCTCCAGACTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATTGTTTTATCACACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTTCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTCCTCTCCTTAACTTACCAAAAAGTTCCTAGATCTGTGCTGGCCGAGGCCATCAACATAGAAGGTTTGGCCTTGGACAAATTCCTTGAACACCAAGTAGCCAACGGTGGTTGGGTCATTGAGATAGGCCATGGCAAGGGTCAACTTATCGTCCTACCAAGAAATGAATTCAATGACCCAGCATCAAAGAAAAACACTGCAGACAGCATGCCATTGGATCAAATTACACGCATTTTCCCTATTCTGGGCTGA 693 0.4574 MGREREASKQQVGYAEQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANGGWVIEIGHGKGQLIVLPRNEFNDPASKKNTADSMPLDQITRIFPILG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0521 230 FunFam Eukaryotic translation initiation factor 3 subunit K 126 229 - -
Lele21g0521 230 ProSiteProfiles PCI domain profile. 45 203 IPR000717 -
Lele21g0521 230 FunFam Eukaryotic translation initiation factor 3 subunit K 7 123 - -
Lele21g0521 230 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 6 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele21g0521 230 Pfam CSN8/PSMD8/EIF3K family 65 192 IPR033464 -
Lele21g0521 230 Gene3D - 126 228 IPR036388 -
Lele21g0521 230 Gene3D ARM repeat; domain 1 6 123 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Lele21g0521 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 13 227 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele21g0521 230 SUPERFAMILY ARM repeat 13 132 IPR016024 -
Lele21g0521 230 SUPERFAMILY "Winged helix" DNA-binding domain 135 227 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0521 Lele-ChrLele21 3451979 3454535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0521 1 230 Eukaryotic Initiation Factors Gene Family AT4G33250 73.160 1.77e-124 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0521 21 3451979 3454535 Lele21g0521 21 3451979 3454535 ECH
Lele21g0521 21 3451979 3454535 Lele23g1525 23 19675538 19678013 hybridization
Lele21g0521 21 3451979 3454535 Lele24g0524 24 3460696 3463215 hybridization