Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0512 ATGAGTGGGATGAAGCTCAAGTTCATAGCTCTGCAAGTTTTTCTACTTTTGGCGGCTCTTCTTGGTTTCAATGCACGGGAATCCAATGTGACAGTGAATGAGATGACTTGCAGTTCCTTAAACAGTCCTAAGAATAGAGAAAGTGGAGATCCATGCCCAGATGGTTGGGTTGTTGACCCTAATAAAGCCAGGTGCTTTTACCACGTTGAAAAGCCTCAATCTTGGAATGACTCAGAGACCCATTGTAATAAATGTGGCGGACATTTAGCTTCTTTGATATCTCTTCCAGAACTACACTTTGCTAAGAGTCTCTGTGGTGACAGTTGCTGGGTTGGAGGAAGAAGAATTAACTCTACAGCTACTTATGAGTGGGTGTGGTCTGACAAATCTCAATGGAATAAGTCCATGTCTCCTTTGTTGCTTGATCCAACTAATTGTACTGGATTATCCTGCAACACAAAAGATGCAGTCGATACATGTACAATTATGACTAATCATTCGGATTCTCTTATGAGCAATAGATGCGACAAACTGAATGCGTCAGTGTGTGTACTTGATATAGATAAAAAATGTTACCACATGCGCTGCTACAGGGAATATCTTATCATCCTTGCAGGGGTGAGTGCATTGATCCTCTGTACAACGGCAGCTGTTGTGGTATGGCTTCTTGCACATAAACGGGGCAAGAAGAGAAGACGATCTAGAAAAGTATCTAATCCAGCTGCTTCTCAGTTAGTTCCTCCCTCATGGAAAGTTTTTACCAAAGAGGAATTAACGTCGATTACAAAGAACTTTAGTGAAGGTAACCGCCTTGTTGGGGATGCCAAGACTGGTGGTACATATAGTGCAGTCCTACCTGATGGCTCAAAGGTTGCAGTCAAAAGATTGAAGAAGTCAAGTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGAGTTGCAAGACTTCGGCATCCTAATTTGGTGGCTGTGAAGGGATGCGGCTATGATCATGGTGACCGCTACGTTGTTTATGAGTTTGTAGTGAATGGCCCCTTGGACAAATGGCTACATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGACTATGAGAATGAAAATTGCCACAACACTTGCTCAAGGAATTGCCTTTCTGCATGACAAGGTGAAGCCACAAGTTGTTCATCGTGATATACGGGCCAGTAACGTACTGCTGGATGAGGAGTTTGGAGCTCACCTTATGGGAGTTGGTCTATCCAAGTTCGTGCCATACGAAGCAATGTGTGAGAGGACAGTGATGGCAGGTGGCACTTATGGATATCTTGCTCCAGAGTTTGTGTATAGAAATGAGCTGACAACCAAGAGCGATGTTTATAGCTTTGGCGTACTGTTACTTGAGATAGTGAGCGGACGTAGACCTGCACAGGCAGTGGATTCAGTGGGTTGGCAGAGCATATTCGAATGGGCAACGCCGCTAGTGCAAGCACATCGTTATCCAGAACTGTTGGATCCTCATATTTCTTCCTCATCATCATCATCCACCATCCCTGAGGCTAGTACAATCCAGAAGGTGGTTGACCTTGTCTATTCATGCACACAGCATGTCCCATCTATGCGTCCTAGAATGTCTCATGTTGTCCATCAGCTCCAACAATTGGCTAACCCACCAACTAAGTGA 1662 0.4416 MSGMKLKFIALQVFLLLAALLGFNARESNVTVNEMTCSSLNSPKNRESGDPCPDGWVVDPNKARCFYHVEKPQSWNDSETHCNKCGGHLASLISLPELHFAKSLCGDSCWVGGRRINSTATYEWVWSDKSQWNKSMSPLLLDPTNCTGLSCNTKDAVDTCTIMTNHSDSLMSNRCDKLNASVCVLDIDKKCYHMRCYREYLIILAGVSALILCTTAAVVVWLLAHKRGKKRRRSRKVSNPAASQLVPPSWKVFTKEELTSITKNFSEGNRLVGDAKTGGTYSAVLPDGSKVAVKRLKKSSFQRKKEFYSEIGRVARLRHPNLVAVKGCGYDHGDRYVVYEFVVNGPLDKWLHHIPRGGRSLDWTMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMCERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSSTIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLANPPTK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0512 553 Pfam Protein tyrosine and serine/threonine kinase 287 544 IPR001245 GO:0004672|GO:0006468
Lele21g0512 553 ProSiteProfiles Protein kinase domain profile. 266 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0512 553 Gene3D Phosphorylase Kinase; domain 1 225 341 - -
Lele21g0512 553 SUPERFAMILY Protein kinase-like (PK-like) 239 545 IPR011009 -
Lele21g0512 553 Pfam Lectin C-type domain 72 184 IPR001304 -
Lele21g0512 553 ProSiteProfiles C-type lectin domain profile. 61 184 IPR001304 -
Lele21g0512 553 FunFam C-type lectin receptor-like tyrosine-protein kinase 243 341 - -
Lele21g0512 553 SMART CLECT_2 52 184 IPR001304 -
Lele21g0512 553 Gene3D - 30 186 IPR016186 -
Lele21g0512 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 172 547 - -
Lele21g0512 553 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 342 553 - -
Lele21g0512 553 Gene3D Transferase(Phosphotransferase) domain 1 342 549 - -
Lele21g0512 553 SMART tyrkin_6 259 544 IPR020635 GO:0004713|GO:0006468
Lele21g0512 553 SUPERFAMILY C-type lectin-like 32 186 IPR016187 -
Lele21g0512 553 CDD CLECT 64 183 - -
Lele21g0512 553 ProSitePatterns Tyrosine protein kinases specific active-site signature. 388 400 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0512 Lele-ChrLele21 3360377 3364006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0512 82 550 Receptor kinase-like Gene Family AT1G52310 68.973 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Lele21g0512 PK_Tyr_Ser-Thr 2.8e-38 CL0016