Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0504 ATGTCGAGCTCCTCGGATTTTTCCGGCCTGAAGCCGGCCAAGTTGCCGGAGAAGCCCTCTTTCTCCCAGACTTGTAGTATGCTGAGTCAGTACCTGAAGGAGAAGGGAAGCTTTGGAGATCTTACCCTCGGGATGACGCGCGGCGCCGAAGCAATTGGGTCAACTGAAGCATCTTGTCAAACTGCGACAACCATGGACTTGTTTCCAACCAAGGAAAACACTGTGACTAAGGATCCTAAGACTCCACAATTGACAATCTTTTACGGCGGACAAGTCCTTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAGGAGATCATGAGTTTTGCCAGCAAAGGAAACTCCCAAAGCCAGAACCCCTCTGTTTACACTTTTGCTCAGAGCTCACCTTCGTTTCCTGCTAATTTGGTCAGAGCCTCTGCTGATCCAAGCGCTTCAATCACTCCTCGTCCTCAAGCACCATCCAGACCTATTACTTGCGGTATAATCTTTTGA 495 0.4929 MSSSSDFSGLKPAKLPEKPSFSQTCSMLSQYLKEKGSFGDLTLGMTRGAEAIGSTEASCQTATTMDLFPTKENTVTKDPKTPQLTIFYGGQVLVFDDFPAEKAKEIMSFASKGNSQSQNPSVYTFAQSSPSFPANLVRASADPSASITPRPQAPSRPITCGIIF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0504 164 ProSiteProfiles Tify domain profile. 77 112 IPR010399 -
Lele21g0504 164 Pfam tify domain 79 111 IPR010399 -
Lele21g0504 164 SMART tify_2 77 112 IPR010399 -
Lele21g0504 164 MobiDBLite consensus disorder prediction 1 22 - -
Lele21g0504 164 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 144 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0504 Lele-ChrLele21 3299150 3300184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0504 17 117 Tify Gene Family AT1G19180 42.958 5.33e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele21g0504 tify 5.6e-19 No_clan