Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0501 ATGGCCGCTGTTCGACCCCCCATTTTCTTCTCCTTCTTCTTCCTCCTCCTCACTCTTCCTTCCTCCTCTTCTTCTTCCGACGCCGATGCCCTCCTTAAGCTCAAGCAGTCACTCACCAATTCTGCTTCTCTTTCTTCCTGGGTCCCCAATTCTCTGCCCTGCCGATGGCCCGGAATCATGTGCGACAACAACACCGTCATGGGTCTTCACCTTGCCGACATGGGTCTTTCCGGCAAGGTCGACATTGACGCAATGTTGGAGATTAAAGGCCTTCGAACCGTCAGCTTGGTGAACAATTCCTTCTCGGGTCCTATCCCAGAGTTCAACAGAATCGGCGCTCTCAAGGCTTTATACCTCTCCTCCAACCAATTTTCCGGGGAGATTTCCTCGGATTTCTTCTCCTCTTTGAACTCGTTGAAGAAAATCTGGTTTGATGAGAACAAATTCTCCGGAACCATCCCCGATTCCATATCCCAGCTGGACAATCTCATAGAGATTCACGTAGAGAACAATGAATTCTCCGGACCCATCCCGCATCTAAAGCAGAAGATCAGATCGCTGAACATGTCCAACAACAAACTTGAAGGTCCAATCCCAGAGAGCTTGACAAAATTCGGGGCTAATTCCTTCCAGGGAAACGAGGGGCTATGCGGGAAACCTCTAGACAAGGCGTGCGACCAGAAGGGTACTGAAAGTAAGAATTCTTCCGGCAACGTCATGCTGATCATTCTCTCCATCGTCTGCTTGATCATCGCAATCGCGCTGTTCATAGCGGTTAGGTCAAGGCGCCATCTAGACGGCGACTTCAGCGTGCTGAACAGAGACAGCATAGACGAGGTGCAAGTGCACGTGCCGAGCTCATCCGAAAGCAGAGACTCGGAATCGAGCCGGAGAGGGACAGGTTCGAAGAGGGGTGGGGCGAAGAGCGGGAGTGCGGATCTGGTGGTGGTGAATGAGGAGAAGGGCGTGTTTGGGTTGCCGGATTTGATGAAGGCGGCCGCGGAGGTTCTCGGAAACGGAGGTATGGGATCGGCATATAAGGCGGGCATTGCGAGTGGATTGAGCGTGGTAGTGAAGAGGGTGAGAGCGATCAATCAGATAGGTAGAGATTATTTCGACGCCGAGATGAGAGGCTTTGGGAGAATCAAACATGCCAACATCTTGACGATTCTGGCTTACCATTTTCGCAAAGAGGAGAAGCTCATCATCTCAGAATACATGCCCAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGAGGTTCATCTCATGCGGATCTGAACTGGCCCGTTCGTTTCAAGATAATCAAGGGAATTGCACAGGGGCTTCGATTCCTTCATTCTCATTTCTCTTCCTACGATCTTCCCCACGGCAACTTGAAATCCAGCAATGTCCTCCTAACAAAGGATTACCAGCCACTCCTCTCTGATTACGCCTTACATCCGCTTCTCAACCCCAATTCTTTCAACGCTTTGTGCGCATTCAAATCCCCAGATTACGTGCAGTACCAGGTAGTTTCCCAGAAAACCGACGTCTACTGCCTCGGAATCATCATCCTCGAGATCATCACCGGCAAATTCCCTTCTCAGTATCATAGCAACGGCAAGGGCGGCACCGATGTCGTGCAATGGGTGCTCGCTGCAATTTCTGAGAGAAGAGAAGCCGAAGTGATTGATCCCGAAATCGCAAACACCCCCGGCTCCTTAGATCAAATGCTGCAAATTCTCCAAGTCGGAGCCGCTTGCACCGAAAGTAACCCCGAACAACGAATTAACTTGAGTGAAGCCATTAGGAGGATAGAGGAGGTACGAGCCTAA 1818 0.5066 MAAVRPPIFFSFFFLLLTLPSSSSSSDADALLKLKQSLTNSASLSSWVPNSLPCRWPGIMCDNNTVMGLHLADMGLSGKVDIDAMLEIKGLRTVSLVNNSFSGPIPEFNRIGALKALYLSSNQFSGEISSDFFSSLNSLKKIWFDENKFSGTIPDSISQLDNLIEIHVENNEFSGPIPHLKQKIRSLNMSNNKLEGPIPESLTKFGANSFQGNEGLCGKPLDKACDQKGTESKNSSGNVMLIILSIVCLIIAIALFIAVRSRRHLDGDFSVLNRDSIDEVQVHVPSSSESRDSESSRRGTGSKRGGAKSGSADLVVVNEEKGVFGLPDLMKAAAEVLGNGGMGSAYKAGIASGLSVVVKRVRAINQIGRDYFDAEMRGFGRIKHANILTILAYHFRKEEKLIISEYMPKGSLLYVLHGDRGSSHADLNWPVRFKIIKGIAQGLRFLHSHFSSYDLPHGNLKSSNVLLTKDYQPLLSDYALHPLLNPNSFNALCAFKSPDYVQYQVVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLAAISERREAEVIDPEIANTPGSLDQMLQILQVGAACTESNPEQRINLSEAIRRIEEVRA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0501 605 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Lele21g0501 605 SUPERFAMILY Protein kinase-like (PK-like) 335 600 IPR011009 -
Lele21g0501 605 SUPERFAMILY L domain-like 25 205 - -
Lele21g0501 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 604 - -
Lele21g0501 605 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Lele21g0501 605 Gene3D Ribonuclease Inhibitor 134 228 IPR032675 -
Lele21g0501 605 FunFam Nuclear pore complex protein NUP107 24 179 - -
Lele21g0501 605 Gene3D Ribonuclease Inhibitor 26 133 IPR032675 -
Lele21g0501 605 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0501 605 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515
Lele21g0501 605 Gene3D Phosphorylase Kinase; domain 1 307 406 - -
Lele21g0501 605 ProSiteProfiles Protein kinase domain profile. 331 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0501 605 MobiDBLite consensus disorder prediction 282 311 - -
Lele21g0501 605 Gene3D Transferase(Phosphotransferase) domain 1 407 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0501 Lele-ChrLele21 3277627 3279532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0501 1 603 Receptor kinase-like Gene Family AT3G42880 47.649 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele21g0501 Pkinase 6.5e-26 CL0016