Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0500 ATGGCGTCTGGAGCTGTATCGGCATCAGAGATCGCGGCCAAGTTGAATCTGCAGCCTCACCCCGAAGGTGGATTTTTCGCGGAGACTTTCCGTGACGGTTCCGTTCAACTTGTCAAGTCTCAGCTCCCACCCGAATATAAAGTTGACCGCCCGGTGTCTACTTGCATATACTTTCTGCTTCCGTCGGGGAGTGTTTCTCGCCTGCATCGTATACCCTGTGCTGAAACCTGGCATCATTACATAGGAGAACCTCTTACGGTAGTGGAAATAAATGATAAAGATGGAAGTGTCAAGTTCACCTGCCTTGGATCTAATCTGTCCGATAATCAGAAACCACAGTACACAGTGCCTCCCAATGTGTGGTTTGGTTCATTCCCCACAAAAGATTTTGATATATCGCCAGATGGGTCTGTGCAAAGAACTCCAACTAGAGATCGTGAGAGCCATTACTCCCTAGTAGGTTGCACTTGTGCCCCCGCCTTTCAGTTCCAAGATTTTGAGCTGGGAAAACGTTCTGACCTCATTTCTCAATTTCCCCACTTGGAGTCTCTCCTCAGCGCTCTCACCTATCCTGATGATTCCTCAGCGAGTCACTGA 597 0.4874 MASGAVSASEIAAKLNLQPHPEGGFFAETFRDGSVQLVKSQLPPEYKVDRPVSTCIYFLLPSGSVSRLHRIPCAETWHHYIGEPLTVVEINDKDGSVKFTCLGSNLSDNQKPQYTVPPNVWFGSFPTKDFDISPDGSVQRTPTRDRESHYSLVGCTCAPAFQFQDFELGKRSDLISQFPHLESLLSALTYPDDSSASH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0500 198 Pfam Cupin superfamily (DUF985) 10 168 IPR009327 -
Lele21g0500 198 CDD cupin_YML079wp 8 184 IPR009327 -
Lele21g0500 198 PANTHER RMLC-LIKE JELLY ROLL FOLD PROTEIN 5 192 IPR039935 -
Lele21g0500 198 Gene3D Jelly Rolls 2 187 IPR014710 -
Lele21g0500 198 SUPERFAMILY RmlC-like cupins 5 190 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0500 Lele-ChrLele21 3274532 3275978 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0500 21 3274532 3275978 Lele21g0500 21 3274532 3275978 ECH
Lele21g0500 21 3274532 3275978 Lele23g1549 23 19863756 19865200 hybridization
Lele21g0500 21 3274532 3275978 Lele24g0503 24 3260557 3267480 hybridization