Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0471 ATGGTATGCGTGGGGTTGCCGGGAGTAGAGCCGGCAGCCAACTCCCCCACCCTCAACAAGCGCCACACCGATCTTTCCATTAACGATAGCAGCGGTGGAAGCGGCAATCGAGAAGACGATGAAGAAAGAGAAAACGGAGACGAGCCCAAGGAGGGTGCAGTCGATGTCGGAACCCGCCGGCCCAGGGGCCGACCTCCTGGCTCCAAAAACAAACCCAAGCCGCCCATCTTCGTCACCCGAGATAGTCCCAACGCCCTAAGAAGCCACGTGATGGAAGTTGCCGGTGGAGCCGACGTTGCAGAGAGTGTGGCTCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGTGTTCTCAGTGGGAGCGGCTCCGTCGCCAACGTCACTCTCCGTCAACCCGCTGCCCCTGGAGCTGTTGTGGCCCTCCATGGTAGGTTTGAAATTCTATCCCTAACAGGTGCGTTCTTGCCGGGACCCGCTCCTCCCGGCGCGACGGGGCTCACGGTGTATCTCGCAGGAGGACAAGGGCAGGTCGTCGGAGGAAGTGTGGTCGGGTCTCTAGTAGCGGCCGGACCAGTGATGGTCATTGCTGCGACTTTTGCTAATGCGACTTACGAAAGACTACCACTTGATGATGATGATGAGGGAGCCAGCGCCGCGGCTCAAGGAGGAGGAGGAGGAGGATCACCGCGGGGAATCGGTAGCAGCGGTGGCCAGTCTCTGCCGGCTGGACTTCCTGATCCGTCGTCCCTGCCTTTGTACAATCTGCCGCCGAATCTGATGCCCAACGGTGGTGGAGGGCAGGTGGGTCATGAAGCTTTTGCTTGGGCTCAGGGAAGACCACCTTACTGA 846 0.5993 MVCVGLPGVEPAANSPTLNKRHTDLSINDSSGGSGNREDDEERENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGASAAAQGGGGGGSPRGIGSSGGQSLPAGLPDPSSLPLYNLPPNLMPNGGGGQVGHEAFAWAQGRPPY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0471 281 MobiDBLite consensus disorder prediction 210 281 - -
Lele21g0471 281 MobiDBLite consensus disorder prediction 1 83 - -
Lele21g0471 281 Gene3D - 86 215 - -
Lele21g0471 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 199 IPR005175 -
Lele21g0471 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 211 - -
Lele21g0471 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 276 IPR014476 GO:0003680
Lele21g0471 281 CDD DUF296 87 170 IPR005175 -
Lele21g0471 281 FunFam AT-hook motif nuclear-localized protein 86 213 - -
Lele21g0471 281 ProSiteProfiles PPC domain profile profile. 83 221 IPR005175 -
Lele21g0471 281 MobiDBLite consensus disorder prediction 16 33 - -
Lele21g0471 281 PIRSF ESCAROLA 8 281 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0471 Lele-ChrLele21 3055305 3057042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0471 19 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.528 2.24e-100 293