Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0468 ATGTGTGTTGATTGTGTTCACACTGCTGCCTTCTCTCTTCTTGGCCCAGTTGATGATTTCCACTTCGAGAATTACTCGAGCGAAGAGACTGACCAGCTAGAAGATGCAGATTCAGGAGGAACCAGACGCTCTTACGAGTGCACATTTTGCAGAAGGGGCTTCACCAACGCTCAGGCGTTAGGGGGTCACATGAATATTCATAGAAAAGACAGAGCCAAGGCCAAACAAAGCACGCATAATTCTTCTTCTTTGCTTTCAAACAAATTGTCCAATGAGGAGTCCTTTGCATCAGCCTCCCCTTTTCTTTCAGAAATATCTTCAGGCCAACAATCCTCAAGGTTTTACTCCATTTTCGAGGTTCAGGGAAACTACAACATGTATTTCCAGTCATCTTCGACTGCAACAAACCCTTCTCCTGCATCATATGCCTTTCCCTTTGAGTATCTTAATCCAATGACTCATCGTCAGTCTGTGGATATGAAGCAAGAGCTTCTAGGGGCCAATTTGAGTCTCCAGATTGGTCCTAGTCATCATGTGGAATCTACTCAGAAAGATGGCGAAGTGGATTTAGAGCTCAGACTTGGGCATCATCCACATTGA 600 0.4467 MCVDCVHTAAFSLLGPVDDFHFENYSSEETDQLEDADSGGTRRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQSTHNSSSLLSNKLSNEESFASASPFLSEISSGQQSSRFYSIFEVQGNYNMYFQSSSTATNPSPASYAFPFEYLNPMTHRQSVDMKQELLGANLSLQIGPSHHVESTQKDGEVDLELRLGHHPH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0468 199 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Lele21g0468 199 Gene3D Classic Zinc Finger 28 100 - -
Lele21g0468 199 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Lele21g0468 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Lele21g0468 199 PANTHER OS07G0101800 PROTEIN 26 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0468 Lele-ChrLele21 3017049 3018515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0468 37 76 C2H2 Transcription Factor Family AT3G09290 72.500 2.91e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele21g0468 None None None