Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0459 ATGGACTCCTGTTTCTCCATCTTCCACTCGCCCGCCTCCGAATTCTCCTCCGATTCCTCCTTTGCTTCCTCCGATTCCTTCTTCTCCTCCAACTTCCCCAATTCTTACCTCCCCTTCAACGAGAATGACCCCGACGAGATGCTTCTCTACGGCATGATTTCCAAGGCCAACCACAATGATGCCCGCGATGAATCTTTCAATTCCGTTAAGGAGGAGGAGGTCAGCTCCGACGCCACTGCTTTCGGGGCCGCCGCCACCCCCAAGGAGAAGAGCTACAGAGGGGTGCGGAGGCGGCCCTGGGGGAAATTCGCGGCCGAGATAAGGGATTCCACCAGGCACGGCATAAGGGTGTGGTTGGGGACCTTCGATAGTGCAGAGGCGGCGGCTTTAGCATACGATCAAGCGGCGTTTTCCATGAGGGGATCGGCGGCGATACTGAACTTCCCGGTGGAGAGGGTGAGGGAGTCTCTGAAAGAGATGAACTACGGATCGGAAGAAGGGTGCTCGCCGGTGGTGGCTCTAAAGAGAAAGCACTCGTTGAGAAGAAAAGTGAATAGTAACAAGAAGAAGAACAAGGCGGACGGCGGTGATATGAGAATAGACGATGTGGTAGTGCTGGAAGATCTCGGCTCAGATTACTTGGAACAACTCCTGATGTCCTCGGAGAATCCTAGGCCTTCAGAATCGCATTGCCTCAATGTTCATTAA 708 0.541 MDSCFSIFHSPASEFSSDSSFASSDSFFSSNFPNSYLPFNENDPDEMLLYGMISKANHNDARDESFNSVKEEEVSSDATAFGAAATPKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLKEMNYGSEEGCSPVVALKRKHSLRRKVNSNKKKNKADGGDMRIDDVVVLEDLGSDYLEQLLMSSENPRPSESHCLNVH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0459 235 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Lele21g0459 235 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Lele21g0459 235 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Lele21g0459 235 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele21g0459 235 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Lele21g0459 235 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Lele21g0459 235 PANTHER DNA-BINDING DOMAIN 56 221 IPR044808 GO:0003700|GO:0009873
Lele21g0459 235 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Lele21g0459 235 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Lele21g0459 235 CDD AP2 90 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0459 Lele-ChrLele21 2945884 2946591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0459 37 223 AP2-EREBP Transcription Factor Family AT3G23240 62.234 5.64e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g0459 AP2 8.8e-15 CL0081