Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0452 ATGGACGGTGGGGTTCTCAATTCTGTGATCAATAGGCTTCTTGAAGTCAGAGGGAGACCTGGGAAGTTGGTTAATCTTGCAGAAACAGAAATCAGGCAGCTCTGTTTTGTCTCCAGGGACATCTTCTTGAGGCAGCCCAATCTGCTGGAACTTGAAGCTCCAATTAAGATTTGTGGAGACATTCATGGTCAATATCCTGACCTGCTGAGACTTCTTGATCATGGTGGATTACCCCCTCGCTCCAATTACTTGTTCTTAGGGGATTACGTGGATCGCGGCAAGCAAAGTCTGGAGACAATTTGTCTTCTTCTTGCCTACAAAATAAAGTACCCTGATAACTTTTTCCTTCTGAGGGGCAATCACGAATGTGCTTCTATCAACCGTATCTATGGATTCTATGATGAATGTAAGCAAAGATACAACGTTAGGCTCTGGAAAATATTCACAGATTGTTTTAACTGCTTGCCCGTGGCGGCTCTTATCGACGAAAAAATTCTATGCATGCACGGTGGACTCTCCCCTGAGTTGTACAACTTAAAGCAGATTAGGACTTTACCTCGTCCTTGTGAAGTACCTGAATCTGGTCTGCTATGTGATCTTCTCTGGTCTGATCCTTCTAAAGACATCTACGGTTGGGGAGCGAACGAACGCGGCGTTTCGTATACTTTTGGTGCTGATAGGGTGACAGAGTTTCTTCGAAAAAATGATCTGGACTTGATCTGTAGAGCTCACCAGGTTGTGGAAGATGGATATGAGTTCTTTGCTAATAGACAGCTTGTAACTGTGTTCTCAGCACCAAATTACTGTGGAGAGTTTGACAATGCTGGTGCCATGATGACTGTTGATGAGACACTTATGTGCTCTTTCCAAATTTTAAGGCCCATGGAGAAAAAACCTAGGTTTGGCTTTGGAAGCACAACTACAGTCAAACCCAGTACTCCAACTAAAATCAAGGCTTTGTATTATAATGGCAGAAATGCCAAGATGACTTTGAACGTCATTTGGAAGTCAGGGATATTGAGCACTGTAAATTCTGATGGTGAAGGTGCTATGTTTCTTGCTCATCTGGTTTGCATCAGAAAGCTAATGGGTTTTGACAATTTCAAGAATTGCGTCATCTACGATTAG 1128 0.43 MDGGVLNSVINRLLEVRGRPGKLVNLAETEIRQLCFVSRDIFLRQPNLLELEAPIKICGDIHGQYPDLLRLLDHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKQRYNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELYNLKQIRTLPRPCEVPESGLLCDLLWSDPSKDIYGWGANERGVSYTFGADRVTEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPMEKKPRFGFGSTTTVKPSTPTKIKALYYNGRNAKMTLNVIWKSGILSTVNSDGEGAMFLAHLVCIRKLMGFDNFKNCVIYD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0452 375 SUPERFAMILY Metallo-dependent phosphatases 19 298 IPR029052 -
Lele21g0452 375 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
Lele21g0452 375 SMART pp2a_7 26 296 IPR006186 GO:0016787
Lele21g0452 375 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Lele21g0452 375 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Lele21g0452 375 FunFam Serine/threonine-protein phosphatase 2 302 - -
Lele21g0452 375 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Lele21g0452 375 CDD MPP_PP1_PPKL 5 294 - -
Lele21g0452 375 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Lele21g0452 375 Gene3D - 4 305 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0452 Lele-ChrLele21 2904091 2906286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0452 20 242 Calmodulin-binding Proteins AT5G63870 31.698 1.35e-28 111