Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0445 ATGGTGAGAGCTCCTTGCTGTGAGAAGATGGGACTGAAGAAGGGTCCTTGGACTCCCGAGGAAGACCAGCTCTTGGTCTCCTACATTAAAAAACATGGCCATGGCAATTGGCGAGCCCTCCCGAAGCAAGCTGGTCTTTTAAGATGTGGCAAGAGTTGCAGACTCCGCTGGATCAACTACTTAAGGCCAGATATAAAGAGAGGGAACTTCACACCAGAAGAAGAAGAAACCATCATTAAGCTCCATGAGATGCTTGGCAACAGGTGGTCAGCAATTGCCGCTAAATTACCAGGAAGAACAGACAACGAGATAAAAAATGTGTGGCATACCCACTTGAAGAAGAGGCTTCAGAAAACAAACATTTATTCAGATTCCAAAACCAGATCATCAGGCTCTAAACCTTCAATCAAACGATCTGTTTCCAATTCCAGCACGGTGACAGCTCCATCATCGGAACCTGGGAGTTTCATCGGTTCCCCAGAAAAGGACACGACATCATCGTCAGTTTCAGCATCATGCACAACAACTTGTTCTAGTGATTGTGGGCAGAGCATGGCCATCAAGTGTGAAGACATAGATTCATCACTGGAACCTTATGTATTGCCTCAGATTGATGAAAGCTTTTGGTCAGAAGCAGCAATGGATGATAATCGTGCTACCATTGAAAATGAATTACCAGTTCCTCAATACCCATTTGATTCTGTAGAATCATCGTCCCAACAAGGTTATGGGTATAATAATAATGGTTTGAACTTTGACGATGGAATGGATTTCTGGTACGATGTATTCATCAGAACAGGGGATTTTACAGAGTTGACGTTCTGA 825 0.4376 MVRAPCCEKMGLKKGPWTPEEDQLLVSYIKKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTPEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLQKTNIYSDSKTRSSGSKPSIKRSVSNSSTVTAPSSEPGSFIGSPEKDTTSSSVSASCTTTCSSDCGQSMAIKCEDIDSSLEPYVLPQIDESFWSEAAMDDNRATIENELPVPQYPFDSVESSSQQGYGYNNNGLNFDDGMDFWYDVFIRTGDFTELTF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0445 274 MobiDBLite consensus disorder prediction 122 171 - -
Lele21g0445 274 MobiDBLite consensus disorder prediction 119 171 - -
Lele21g0445 274 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele21g0445 274 Gene3D - 13 66 - -
Lele21g0445 274 FunFam MYB-related transcription factor 13 66 - -
Lele21g0445 274 Gene3D - 69 140 - -
Lele21g0445 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele21g0445 274 FunFam Transcription factor MYB15 68 143 - -
Lele21g0445 274 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele21g0445 274 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Lele21g0445 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Lele21g0445 274 CDD SANT 16 61 IPR001005 -
Lele21g0445 274 SMART sant 66 114 IPR001005 -
Lele21g0445 274 SMART sant 13 63 IPR001005 -
Lele21g0445 274 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele21g0445 274 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele21g0445 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele21g0445 274 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0445 Lele-ChrLele21 2861537 2862968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0445 1 272 MYB Transcription Factor Family AT2G31180 51.087 5.90e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g0445 Myb_DNA-binding 2.9e-16 CL0123