Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0433 ATGGAAGCTACAAGGTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAAATGAAGTCTCCCAAGAACAAGGAATCTACAGCTGCTGTAAAAGAAGGGTCAAGACCACCAACAAATGAAGAAGCACCATCAAATGTGACCAAACAGAAGGCAGCTGCTGCAAAGCAGTACATAGAAAATCATTACAAGAAGCAGATGAAGGACCTGCAGGAGAGGAAGGAGAGACGTAATTTGCTAGAGAAAAAGCTGGCTGATGCTGAAGTCTCTGAAGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACGGAATATATGCGCCTTCAAAGGCATAAGATGGGAGCTGATGATTTTGATCCATTGACCATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGAGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTCAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCCTTTCAAGATGAAGAGTATCTATATCTCATTATGGAGTATCTCCCTGGTGGGGATATGATGACTTTGCTGATGCGGAAGGATACTCTCACAGAAGATGAGGCCAGATTCTATGTTGGGGAGACTGTGCTAGCGATTGAATCAATTCATAAACACAATTACATTCATAGAGACATCAAGCCTGACAACTTGTTGCTAGATAGATACGGTCACATGAAATTATCAGATTTTGGATTATGCAAACCACTAGACTGCAGTAATCTTCAAGAAAAGGATTTTTCTGTTGGAAGCAATTTAAGTGGAGCCCTCAGGAGTGATGGACGTCCTGTAGCACCTAAACGTACTCAACAGGAACAGCTTCAGCATTGGCAGAAAAATAGACGGATGCTTGCCTATTCTACGGTTGGAACACCTGACTATATTGCCCCAGAAGTTCTTCTGAAGAAAGGATATGGGATGGAGTGTGATTGGTATGATAGAATGTGTTTTATTTCTTATCTTCATCAAATTCCACTGCACACTCTCTTCCCCTTGGTTTATTGCCTTTTTATACTGCGATTGTATGATGAGTTTGTTAATGGTTTAAGGTGGTCTCTGGGTGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCTGATGAGCCGATGTCAACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCAGAGGAGGCTAAGCTATCTGCAGAGGCAAAGGATCTTATATGCAGACTCTTATGTAATGTGGACCAGCGACTTGGCACTAAAGGGGCAGATGAAATAAAGGTTCACCCGTGGTTCAAGGGTATTGAATGGGACAAACTGTACCAAATGAAAGCTGCATTCATCCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAATTCAGCCTTCCTCAAAATCGGGACCATGGAGAAAGATGCTGTCATCTAAAGACATTAACTTTGTTGGATACACTTATAAGAACTTTGAGATCGTGAATAACCATCAACTAACCGGAATCGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGACCGTCTATTAAGACGCTGTTTGATGACGAGTCAACTATGGATGCCAAGCAGCCAGTCCAAGGGAGCTTCTTAAACCTCCTACCTACTCAACCGGAAGTTCCGGAGAAAAGTGAATCACAGTGA 1761 0.4145 MEATRCWFNKFKSKDKMKSPKNKESTAAVKEGSRPPTNEEAPSNVTKQKAAAAKQYIENHYKKQMKDLQERKERRNLLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFDPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSNLQEKDFSVGSNLSGALRSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWYDRMCFISYLHQIPLHTLFPLVYCLFILRLYDEFVNGLRWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVDQRLGTKGADEIKVHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQIQPSSKSGPWRKMLSSKDINFVGYTYKNFEIVNNHQLTGIAELKKKSTKPKRPSIKTLFDDESTMDAKQPVQGSFLNLLPTQPEVPEKSESQ 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0433 586 SUPERFAMILY Protein kinase-like (PK-like) 381 509 IPR011009 -
Lele21g0433 586 Gene3D Transferase(Phosphotransferase) domain 1 381 477 - -
Lele21g0433 586 Gene3D Transferase(Phosphotransferase) domain 1 203 281 - -
Lele21g0433 586 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lele21g0433 586 ProSiteProfiles Protein kinase domain profile. 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0433 586 Coils Coil 61 88 - -
Lele21g0433 586 MobiDBLite consensus disorder prediction 561 586 - -
Lele21g0433 586 CDD STKc_NDR_like 117 521 - -
Lele21g0433 586 MobiDBLite consensus disorder prediction 12 28 - -
Lele21g0433 586 FunFam Probable serine/threonine-protein kinase cot-1 202 359 - -
Lele21g0433 586 FunFam Non-specific serine/threonine protein kinase 367 477 - -
Lele21g0433 586 MobiDBLite consensus disorder prediction 539 586 - -
Lele21g0433 586 SUPERFAMILY Protein kinase-like (PK-like) 99 342 IPR011009 -
Lele21g0433 586 MobiDBLite consensus disorder prediction 12 51 - -
Lele21g0433 586 Pfam Protein kinase domain 381 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0433 586 Pfam Protein kinase domain 122 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0433 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lele21g0433 586 SMART serkin_6 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0433 586 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 507 - -
Lele21g0433 586 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Lele21g0433 586 Pfam Protein kinase C terminal domain 476 520 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele21g0433 586 SMART pkinase_C_6 458 522 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele21g0433 586 ProSiteProfiles AGC-kinase C-terminal domain profile. 458 530 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele21g0433 586 MobiDBLite consensus disorder prediction 539 557 - -
Lele21g0433 586 Gene3D Transferase(Phosphotransferase) domain 1 315 343 - -
Lele21g0433 586 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0433 Lele-ChrLele21 2787611 2792721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0433 1 580 AGC Kinase Gene Family AT4G14350 78.103 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele21g0433 Pkinase 1.2e-46 CL0016