Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0394 ATGGACTATGCAACCAATGATGAAATCTCAAGCCCCATTAGTGCTCGACTTTTCGAGCTCTGTGATCCTGAATTGTTCCCAGAGGCTCTGCAGAATCCTGAGGTTACCTCCAGCTCAAACTGCTGCTATGAGGAGAATTCCTCCTATGCCCCAAATATATCTCTAGCTTTAGATGTAGACAATAAGTTCAACAATGGCAATACAATCACCACCACCCAAACAAACACAAATCTGACCAGCACCGCCCCTGCTGCCCCCACTACCACCGACAACAACAATACAACCAACAGTACCAATCTGTCCATTATCTTTGACTCTCAAGATGAAATTGACAATGACATTTCTGCCTCCATAGACTTCTCATCATCTCCTGCTTTTCCTGTCCCTCCATTTCTCCCAGTCACAAGTCAGCAGGATCAACAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACTACACTTGCAGCAAGTTCAGTTGTGGAATGCCTTGCACAATACTCCACAGACTCTGCTGTGGCACCTCTCATGGGGGCTCCGTTAGCTTCTGTTTTTGATGATGATTGCTTATCTTCTGTCCCTTCTTATGTTCCTTTGAACCCTTCATCTCCTTCTTGCTCTTATCTTAATACTGCTGGCATAGGACCTTACATGCCTCTTGGTTCCCTTAATACTGTCTTATCTGCTGATAGTTCTGGGATATTTGGTGGGAGCATTCTTCTGGGATCTGAACTGCAGGCACAAGAACTGGATTACCAGGGAGATAATGGTGGAGTTTATTGTCCAGATTCAATTCAAAGGTTTTTCAACCCGCCAGACCTCCAGGCACTTGGTGCTGAGGGCCAGAAACTTGTAGCTGGGGCTGGGAGTTCCACCACTTTGACACCAGAAATATCAAACTTGGAGGATTCTACCTTCAAGGTTGGAAAGCTTTCTGTTGAACAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTTAGAGGAAGGTTCGCAAAGAATGATGATTTTGGAGATACTCAAAGACCTGCTAGCAGCAATCATGAAGAAGATGATGAAGACGTAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1239 0.4415 MDYATNDEISSPISARLFELCDPELFPEALQNPEVTSSSNCCYEENSSYAPNISLALDVDNKFNNGNTITTTQTNTNLTSTAPAAPTTTDNNNTTNSTNLSIIFDSQDEIDNDISASIDFSSSPAFPVPPFLPVTSQQDQQFDFSSLQPQVTTLAASSVVECLAQYSTDSAVAPLMGAPLASVFDDDCLSSVPSYVPLNPSSPSCSYLNTAGIGPYMPLGSLNTVLSADSSGIFGGSILLGSELQAQELDYQGDNGGVYCPDSIQRFFNPPDLQALGAEGQKLVAGAGSSTTLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEDDEDVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0394 412 MobiDBLite consensus disorder prediction 68 97 - -
Lele21g0394 412 ProSiteProfiles CCT domain profile. 315 357 IPR010402 GO:0005515
Lele21g0394 412 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 80 373 IPR045281 GO:0009909
Lele21g0394 412 Pfam CCT motif 315 357 IPR010402 GO:0005515
Lele21g0394 412 MobiDBLite consensus disorder prediction 351 375 - -
Lele21g0394 412 MobiDBLite consensus disorder prediction 351 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0394 Lele-ChrLele21 2559150 2561809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0394 295 359 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 5.26e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele21g0394 CCT 5.4e-19 CL0281