Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0384 ATGACTCTGGGTGTACTAGGTGGTGGTGGCAATGGTGGCTCTTCTGTGGCTACCCCGAATGAGCCTGCTGTGTCAAATGCTAAGGTTCTGGGTCCAGAATGTTCATCATCGTACAAAGGTGAAACTGAACTTGAACTAGGTTTGGGTCTGAGCCTCGGTGGTCGGCTCGGTGGTTGTGGTGGGAAGGCCAAGCCTTCTTCTGCATGGGGCGAGTGTGGTCGTATTTTGACGGCTAAAGACTTCCCTTCTGGAGTCTCTCATGGACCTTCCGTTGCTGCTTCTCGTTTCTCTGATAGAGTCAGCACTGTGGGTGTTTCTGTTTCTGGCACTAAGAGAGCTGCTGACTCTGTTTCTCATGAAGCTGGATCTCCTACTGCTAACAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGTTCAGCGGGCTGAAGAAGATAAATCCGCCGCCGATAAGAATAATCCCGATGATGTTTCAGTTACTAAAACCGGGACTGTCAACAATACTGAGAAAAACCATCTCGGATTTGTTAAGGTGAATATGGATGGAATCCGCATTGGGAGAAAAGTAGACTTGAATTCTCATTCAAGCTATGAGACTTTAGCTCAAACACTTGAAGAAATGTTTTTCAGCCCTGCTTCAGCTGCTAAATCAGCTGCCGGTACTGAGAAAGAGCCCGGAACGAAACTCTCTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGACAAAGAAGGTGATTGGATGCTTGTGGGAGATGTTCCTTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCTGAAGCCAATGGACTTTCTCCTAGATATCAAGAGAAAAATGAGAGGCTAAGGATTAAACCAATTTAG 921 0.4636 MTLGVLGGGGNGGSSVATPNEPAVSNAKVLGPECSSSYKGETELELGLGLSLGGRLGGCGGKAKPSSAWGECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGVSVSGTKRAADSVSHEAGSPTANSQVVGWPPIRAYRMNSLINQAKVQRAEEDKSAADKNNPDDVSVTKTGTVNNTEKNHLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEEMFFSPASAAKSAAGTEKEPGTKLSKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLSPRYQEKNERLRIKPI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0384 306 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 289 IPR003311 GO:0005634|GO:0006355
Lele21g0384 306 Pfam AUX/IAA family 90 293 IPR033389 -
Lele21g0384 306 ProSiteProfiles PB1 domain profile. 184 286 IPR000270 GO:0005515
Lele21g0384 306 MobiDBLite consensus disorder prediction 1 21 - -
Lele21g0384 306 Gene3D - 178 295 - -
Lele21g0384 306 MobiDBLite consensus disorder prediction 150 176 - -
Lele21g0384 306 FunFam Auxin-responsive protein 179 294 - -
Lele21g0384 306 SUPERFAMILY CAD & PB1 domains 185 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0384 Lele-ChrLele21 2494825 2496929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0384 188 304 B3 DNA Binding Superfamily AT1G59750 33.898 3.91e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele21g0384 AUX_IAA 3.2e-64 CL0072