Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0374 ATGGAGCAAACTCACAGACCCCAAGCCAGTGCAAGGAATTTAGAAGACAGATTTGAACAAAAAGTTAGCAACTTTGCGAAGCCATTTTTGGCATCTCAAAAGGGGCCAAAAAAAACAGAAAAGGTTGAAACTTTTTCAAGAGTTCTTTTGGCTATGTATTGGGGAGGCATGTCTGGGAACAACATGGGTTGGGGTATGAACATGATTGAGGAAGAAGGTTGGAGGAAAGGTCCTTGGACTGCTGAAGAAGACAGATTGCTTATTGAATATGTTAGGCTTCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAAAGCTGCAGATTGAGGTGGGTGAATTATTTGAGGCCTGACCTGAAGAAGGGTCAGATAACACCTCAGGAAGAGAGTATCATTCTTGAGCTGCATGGTAGATGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTACCAGGAAGAACTGACAACGAGATTAAGAACTATTGGAGGACTCATTTCAAGAAGAAGGCGAAAAATTCTCCAGATTCTGCAGAAAAAGTGAAAAATCGCCTCATAAAGAGACAACAATTTCAGCAGCAACAGCAGCAGCAGCAACAACAACAGCAGCAACTTAAATTCAACTTGGACATCAAAGGGATTATGGCTCTTCTGGAGGAAAATGATCACAGCCTAACTATGCCTTGTTTGTCTCAAATGAGGCAAGAAATGTATCAGAACAACATAGAGGAACAAGGCTGCTACTACTCTATGCTCAATGGCAATGTCTCTGCACCAGAACCTTCAAATAATGATGATACTTTCTGGGATGGTCTGTGGAACTTGGACGATTTTCATGGAAATTTCAGTGCAGCAAACAAAGCCAATCTACACAATTTAGTTGCTCCCTTCTGCTAG 918 0.4216 MEQTHRPQASARNLEDRFEQKVSNFAKPFLASQKGPKKTEKVETFSRVLLAMYWGGMSGNNMGWGMNMIEEEGWRKGPWTAEEDRLLIEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHGRWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNSPDSAEKVKNRLIKRQQFQQQQQQQQQQQQQLKFNLDIKGIMALLEENDHSLTMPCLSQMRQEMYQNNIEEQGCYYSMLNGNVSAPEPSNNDDTFWDGLWNLDDFHGNFSAANKANLHNLVAPFC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0374 305 FunFam Myb transcription factor 76 128 - -
Lele21g0374 305 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 70 252 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele21g0374 305 Gene3D - 76 128 - -
Lele21g0374 305 Pfam Myb-like DNA-binding domain 76 123 IPR001005 -
Lele21g0374 305 Pfam Myb-like DNA-binding domain 129 173 IPR001005 -
Lele21g0374 305 CDD SANT 78 123 IPR001005 -
Lele21g0374 305 ProSiteProfiles Myb-like domain profile. 71 123 IPR001005 -
Lele21g0374 305 ProSiteProfiles Myb-like domain profile. 124 174 IPR001005 -
Lele21g0374 305 SUPERFAMILY Homeodomain-like 73 170 IPR009057 -
Lele21g0374 305 Gene3D - 133 177 - -
Lele21g0374 305 CDD SANT 133 174 IPR001005 -
Lele21g0374 305 FunFam MYB transcription factor 133 212 - -
Lele21g0374 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 127 IPR017930 -
Lele21g0374 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 178 IPR017930 -
Lele21g0374 305 SMART sant 75 125 IPR001005 -
Lele21g0374 305 SMART sant 128 176 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0374 Lele-ChrLele21 2434657 2435820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0374 71 305 MYB Transcription Factor Family AT3G24310 59.922 9.51e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g0374 Myb_DNA-binding 2e-16 CL0123