Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0346 ATGTCTGGGAATTTCAATAAAAGGAGAGCGTTGGCAGATCGGTGTTCTGGTATTCTACTATTATTCACTTTACTTCTTTGTACTACAGAGGGATTGAATACAGAGGGGCACTACCTGCTCGAGCTGAAGAGTAGTCTTCATGATGAATCTAATCATTTGGAGAATTGGAAGTCTACTGATGAAACACCTTGTGGATGGACGGGTGTGAATTGCACTTATGAATACAATCCAGTGGTCTGGTCCCTTGATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGTGGTCTGACGCATCTAACTTATCTCAATCTTGCCGACAATGGGCTGACGGGAAATCTACCCAGTGAAATAGGAAATTGCTCGAGCTTGGAATTTCTTTTCTTGAACAATAACCGATTCAGAGGACAAATTCCTGCTGAATTGGGCAAGCTGTCCCTTTTGAGAAGTTTGAATATTTGCAATAACATACTTTCAGGTTCTCTGCCAGAGGAACTGGGAAACTTGTCTTCACTGGTTGAGTTTGTAGCCTACACAAACAATCTGACTGGTCCCCTGCCTCGTTCTATTGGAAATCTAAAGAGTCTCACTACTTTGAGAGCTGGGGGAAATAGATTGTCTGGTAGCTTGCCAAGTGAGATCGGGAGATGTACAAGCATGGAATTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTGCCAACAGAGATTGAGATGCTTCAGAACTTAATAGAACTGCTTTTATGGAATAACCAGTTATCAGGGCTTATTCCCAAAGAGATTGGGAATTGTACCAGCCTTCAAACCCTTGCTTTATATGGAAATGCTCTTCTTGGACCTATACCTGAGGAGATTGGGAATCTCAAATCTCTGGGGAGGTTGTACCTTTATCGAAATAAGTTGAATGGAACCATTCCAAGGACAATTGGGAATCTTTCTCAGGCATTAGAAATTGATTTCTCAGAGAACTCTTTGGTGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCACTTGCTCTTTCTCTTTGAGAACCAGCTATTGGGTGTTATACCCAATGAGTTTAGCAGCCTGAGGAACCTAACAAGGCTGGACCTGTCCATTAATAATCTCACAGGTCCAGTTCCATTGGGGTTCCAGTATTTGACTCGAATGGCTCAGTTGCAACTTAATGACAACTCTCTAAGTGGGACTATTCCTCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTAACAATCACTTGACAGGAACGATACCTCCTCATCTATGTCGAAATTCTAACTTGATGTTGTTGAATCTGGCTTCTAATCGTTTGTATGGAAATATACCAACTGGCCTCCTGAATTGTGAGACATTGGCACTACTACTGTTGGTTGGAAACAGTCTTACTGGTGGCTTTCCTTCGCAACTGTGCAAACTAGTGAACCTTACTGCCGTTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCCGAGATTGGGAGGTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACGTTAGAGTTGCCTAAAGAAATAGGAAACCTTTCTCAATTAGTTACCTTCAATGTCTCGTCCAATTCTTTCATTGGACCAATCCCACATGAAATTGTTAGATGCAAGAAGCTTCAGCGACTTGATATCAGCGGCAACAGCTTTACTGGTTCCCTACCAGGTGGGCTTGGAACACTCTCGCAGTTGGAGCTTCTCAAGCTCTCCGATAATAAGCTTACAGGGAATATTCCTCCAACATTAGGTAATCTGCTTCGTTTGACTGCATTGCAGATGGCTGGCAATTTATTTTCTGGAGAAATACCTCCTGATCTGGGTAATCTCACAAGCTTGCAGATTGCATTGAATCTGAGTTACAATAACCTTTCTGGAAGTATACCTGATAAGCTTGGCAATCTCTATATGCTTGAGTTTCTCCTCCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGTTTGATGGGGTGTAATTTCTCATACAACAATCTTTCTGGGCCTATACCTTCCATTCCACTATTTGGAAATATGGAAATTAGCAGCTTTGTTGGTAACAATGGCCTCTGTGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTATCTTTCTGATCCTCCTATGAAAAATCCTAATGCTTCTCGCACCAAGATTATCATTATTATTGCAACTGTTGTTGGTGGCGTTTCTCTCATTCTTATAGTGTTCATTTTATATTTAATGAGACGTTCACCTAAGCCTACTTCTTCATTGAGGGATTCTGAGATTCCCTCCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTGCTTGAAGCTACCAACAGCTTTCATGACAGTTATGTTATTGGAAGAGGGGCTTGTGGGACAGTTTATAAGGCATTGATGCCATCTGGTAAGACTATTGCTGTTAAAAAGTTAGCATCCAACAGGGAAGGGAACAGCATCGAGAATAGCTTCCGGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATTGTGAAGTTGTATGGATTTTGCTATCACCAAGGTAGCGATCTCCTACTATATGAGTACATGGCAAGGGGTAGCCTAGGGGAGCAACTTCATGGACTTGCAAGCAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGGCTTGCCTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGTGATATAAAGTCAAATAACATTCTGCTTGATGAAAACTTTGAGGCCCACGTGGGTGATTTTGGTTTGGCGAAAGTCATTGATATGCCTCAATCAAAATCAATGTCAGCAGTTGCTGGGTCATATGGTTATATTGCTCCTGGTAAGCTTAGATATTCTGTCTTGGTTTCTCCTTATATTTGTTTAGCCAGTTAG 2991 0.4186 MSGNFNKRRALADRCSGILLLFTLLLCTTEGLNTEGHYLLELKSSLHDESNHLENWKSTDETPCGWTGVNCTYEYNPVVWSLDLSSMNLSGTLNPSIGGLTHLTYLNLADNGLTGNLPSEIGNCSSLEFLFLNNNRFRGQIPAELGKLSLLRSLNICNNILSGSLPEELGNLSSLVEFVAYTNNLTGPLPRSIGNLKSLTTLRAGGNRLSGSLPSEIGRCTSMEFLGLAQNQIGGELPTEIEMLQNLIELLLWNNQLSGLIPKEIGNCTSLQTLALYGNALLGPIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSQALEIDFSENSLVGDIPSEISKISGLHLLFLFENQLLGVIPNEFSSLRNLTRLDLSINNLTGPVPLGFQYLTRMAQLQLNDNSLSGTIPQSLGLYSPLWVVDFSNNHLTGTIPPHLCRNSNLMLLNLASNRLYGNIPTGLLNCETLALLLLVGNSLTGGFPSQLCKLVNLTAVELNQNRFSGPISPEIGRCQKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFIGPIPHEIVRCKKLQRLDISGNSFTGSLPGGLGTLSQLELLKLSDNKLTGNIPPTLGNLLRLTALQMAGNLFSGEIPPDLGNLTSLQIALNLSYNNLSGSIPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFGNMEISSFVGNNGLCGAPLLGCNTNPSYLSDPPMKNPNASRTKIIIIIATVVGGVSLILIVFILYLMRRSPKPTSSLRDSEIPSPDSDIYFPPKDGFTFHDLLEATNSFHDSYVIGRGACGTVYKALMPSGKTIAVKKLASNREGNSIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSDLLLYEYMARGSLGEQLHGLASNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPGKLRYSVLVSPYICLAS 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0346 996 SMART serkin_6 809 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0346 996 SUPERFAMILY L domain-like 386 724 - -
Lele21g0346 996 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 190 - -
Lele21g0346 996 Gene3D Phosphorylase Kinase; domain 1 780 886 - -
Lele21g0346 996 Gene3D Transferase(Phosphotransferase) domain 1 887 989 - -
Lele21g0346 996 SMART LRR_typ_2 484 508 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 364 387 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 244 268 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 196 220 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 580 604 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 653 676 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 292 316 IPR003591 -
Lele21g0346 996 SMART LRR_typ_2 100 124 IPR003591 -
Lele21g0346 996 Gene3D Ribonuclease Inhibitor 413 726 IPR032675 -
Lele21g0346 996 SUPERFAMILY Protein kinase-like (PK-like) 784 985 IPR011009 -
Lele21g0346 996 FunFam Os07g0541700 protein 891 973 - -
Lele21g0346 996 Gene3D Ribonuclease Inhibitor 285 388 IPR032675 -
Lele21g0346 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 726 - -
Lele21g0346 996 Pfam Protein kinase domain 810 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0346 996 ProSiteProfiles Protein kinase domain profile. 809 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0346 996 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lele21g0346 996 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 388 986 - -
Lele21g0346 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 284 388 - -
Lele21g0346 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 886 - -
Lele21g0346 996 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
Lele21g0346 996 SUPERFAMILY L domain-like 34 334 - -
Lele21g0346 996 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 191 282 - -
Lele21g0346 996 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Lele21g0346 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0346 Lele-ChrLele21 2242721 2245711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0346 56 979 Receptor kinase-like Gene Family AT1G73080 38.485 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele21g0346 Pkinase 7.8e-35 CL0016