Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0345 ATGAAGGTCACTGAGAAGTGTGATATCTATAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACGGGAAGAACGCCGGTTCAGCCGCTAGACCAAGGAGGCGATCTGGTGACATGGGTCAAGAGCTATATTCGGAGCCATAACAACACACTGTCCTCTGGTGTGCTTGACAATCGTCTCAATCTCCAAGATCAAACCACTGTGAACCACATGCTCACCGTTCTCAAAATTGCTTTGATCTGCACAAACATGAACCCAACCGATCGCCCATCGATGCGCCAAGTCGTTTTGATGCTAATAGAATCCAACGAGCGAGAAGGAAACTTGGCGGTTTCTCCATCTCGGTATGAGGATCTCGCTTCCAATGAAGATGATGAGCAAAAGAGTACGTGA 390 0.4769 MKVTEKCDIYSYGVVLLELLTGRTPVQPLDQGGDLVTWVKSYIRSHNNTLSSGVLDNRLNLQDQTTVNHMLTVLKIALICTNMNPTDRPSMRQVVLMLIESNEREGNLAVSPSRYEDLASNEDDEQKST 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0345 129 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0345 129 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 100 - -
Lele21g0345 129 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Lele21g0345 129 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
Lele21g0345 129 Pfam Protein tyrosine and serine/threonine kinase 2 97 IPR001245 GO:0004672|GO:0006468
Lele21g0345 129 MobiDBLite consensus disorder prediction 108 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0345 Lele-ChrLele21 2242128 2242517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0345 1 104 Receptor kinase-like Gene Family AT1G08590 41.905 7.67e-20 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele21g0345 PK_Tyr_Ser-Thr 3.5e-07 CL0016