Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0343 ATGAGTCGTGGCGGTTCTTCTTCATCATCGTCATCATCAAGATGGCGCCCAACCCAGGAACAGCTTGTGATTCTTGAGGAGATCTACAGAGCTGGGATCAGGACTCCGAATGCGTCCCAGATTAAGCATATCACAGCTCAACTCTCTTTCTATGGCAAGATAGAGGGAAAGAACGTTTTCTATTGGTTTCAGAACCACAAGGCCAGGGACCGCCAGAAACTCCGCCGCAGATTCAACAAGCAACTTCAGTTACAGCAGCAGCAGCAACGCCACCAGCTCTGTAACTATTACCTTCACCTTCACCATCTGAATCACAACTATAACACTCACCATTATTCTCACTCTCTTATTACTACTGCCTCATCATCTTCCCAACAACAACATTCCTTTTACAATTCCCTTGCCTCGTTCTTACAGGGAGGAGCTGGAGAAACATCAAAACAAGGCACAGTTTACAAATGGAAGATTGAGAATACAGAAGGAGTGATGGAGAAGACATTAAAGCAAGATTGGAGGAGGAGGACGAAGGCGGAAGTAAGTCCAGGTGCCTCATATTGGCCTAAAAGAACCCTCAAGACTCTTGAACTTTTCCCAATCAGGGACAGACTCAAACAAGTGTGA 621 0.4573 MSRGGSSSSSSSSRWRPTQEQLVILEEIYRAGIRTPNASQIKHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRFNKQLQLQQQQQRHQLCNYYLHLHHLNHNYNTHHYSHSLITTASSSSQQQHSFYNSLASFLQGGAGETSKQGTVYKWKIENTEGVMEKTLKQDWRRRTKAEVSPGASYWPKRTLKTLELFPIRDRLKQV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0343 206 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 201 IPR044555 GO:0003700|GO:0099402
Lele21g0343 206 FunFam WUSCHEL-related homeobox 4 12 79 - -
Lele21g0343 206 Gene3D - 4 73 - -
Lele21g0343 206 Pfam Homeodomain 12 72 IPR001356 GO:0003677
Lele21g0343 206 SUPERFAMILY Homeodomain-like 5 75 IPR009057 -
Lele21g0343 206 SMART HOX_1 10 77 IPR001356 GO:0003677
Lele21g0343 206 ProSiteProfiles 'Homeobox' domain profile. 8 73 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0343 Lele-ChrLele21 2238723 2239586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0343 8 80 Wox Gene Family AT2G28610 73.973 5.64e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele21g0343 Homeodomain 2.2e-17 CL0123