Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0340 ATGTTCATGATTTCTAGCACAAATAGTTTTAGTCCTCTCCTGATTGCGGTTGCTAGTTAGTGTGGGCAGATTTGGGGGAAAAAACTTCACTGGCAGCTATTTGAGAACGAGAGTCAGCCAACTATGCTTCTGGACAAGAATGCCCATAAAGAAACCCTTTATGATGTTCTCAATGTGAAGGAAGATGCAAGCTACGAAGAGATTCGTGCCAGTTACCGCAGTGCTATACTCAATTTACATCCTGATAAATTATTGAAGAAATCTGAGAAGTCAAGCAGTCATCAAACATCAGGAGATAGATTCCTCACTGTACAGAAGGCATGGGAAATTCTCAGCAATTTAACCTCCCGTTCAATATACGACAATGAGCTGCGTGGTTCAAGGCAAGAGGCATTGGCTGCAGATGTTGCAGAAGATGTAAGCTTGCAGGATATGATAATTGACGAAGCCGGAGGAGCATTGGATCTCTCTTACCAGTGCAGATGTGGTGATTACTTCGCCATAGACTCTACAGAATTGGAGAAAATGGGGTATTCATTGTTGAGGGATGGTAGTGAGATTTCTTTACGTAGTGGTAATAGTTTGCCAGGTTCAGTGATTCTTCCATGTGGATCTTGTTCTCTGAAAGTTCGCTTACTAATCAACATGGATGAAGATAGCAATTGA 666 0.4189 MFMISSTNSFSPLLIAVASXCGQIWGKKLHWQLFENESQPTMLLDKNAHKETLYDVLNVKEDASYEEIRASYRSAILNLHPDKLLKKSEKSSSHQTSGDRFLTVQKAWEILSNLTSRSIYDNELRGSRQEALAADVAEDVSLQDMIIDEAGGALDLSYQCRCGDYFAIDSTELEKMGYSLLRDGSEISLRSGNSLPGSVILPCGSCSLKVRLLINMDEDSN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0340 221 FunFam DNAJ heat shock N-terminal domain-containing protein-like 130 218 - -
Lele21g0340 221 Gene3D DnaJ domain 37 128 IPR036869 -
Lele21g0340 221 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lele21g0340 221 PRINTS DnaJ domain signature 96 116 IPR001623 -
Lele21g0340 221 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lele21g0340 221 ProSiteProfiles dnaJ domain profile. 52 124 IPR001623 -
Lele21g0340 221 PANTHER DPH3 HOMOLOG-RELATED 52 217 IPR044248 GO:0017183|GO:0046872
Lele21g0340 221 CDD DnaJ 52 113 IPR001623 -
Lele21g0340 221 SMART dnaj_3 51 116 IPR001623 -
Lele21g0340 221 Pfam CSL zinc finger 139 213 IPR007872 -
Lele21g0340 221 Gene3D DPH Zinc finger 129 221 IPR036671 -
Lele21g0340 221 SUPERFAMILY Chaperone J-domain 48 125 IPR036869 -
Lele21g0340 221 Pfam DnaJ domain 53 121 IPR001623 -
Lele21g0340 221 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 136 215 IPR007872 -
Lele21g0340 221 SUPERFAMILY CSL zinc finger 137 219 IPR036671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0340 Lele-ChrLele21 2226106 2226874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0340 48 121 C2H2 Transcription Factor Family AT1G74250 37.838 4.36e-08 51.2