Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0336 ATGAAGCAAATCTTGGTGTTTTTCTTCTCTGTCGTCGTCATCACTCTCTTCTTATGTACGACCCTTGCTTTCTCTTATAACCATGAAGCTTTTCTGCTTTATTCATGGCTTCACAGCTCGCCCTCACCACCACCTTCACATTTCTCTAACTGGAACATTCGTGACAGAAACCCATGCAATTGGACCTCCATAACTTGTTCTCGTCAAGGTTTCGTCACGAAAATCAATGTTTCTTCTGTCCATCTTGATTTGCCTCTACCTTCCAATCTCTCTTCCTTTCGCTTCCTCAGGAAGCTCGTCATACCAAATGCAAATCTCACCGGAACCATCGCTTCCGATATCGGTGCTTGTTCCTCCCTTACCGTCATTTATCTTAGCCATAATAGTCTCACTGGTTCTATTCCTGCAAGTGTTGGGAATTTACCAAATCTCCAGATTTTGGCCTTAAACTCCAACTTCCTCGGTGGAGAAATCCCAAATGAGCTAAGTAATTGCATTGGCCTGAAATCTCTCTTCCTTTCAAATAATCAGCTGGGTGGGACTATCCCATCTTCGCTGGGAAAATTATCAAAACTTGAGAATTTTAGAGCAGGAGGGAACAACAACGTTACTGGGAATATACCGCATGAGCTGGGAAATTGCATTAATTTGGTTTCTTTGGGGTTGACTGAAACCCGGATATCAGGCTCTTTGCCAGCTTCGTTGGGTAGGCTTAAGAAGCTTCAGAGGCTGTCCCTTTGTGATACTATGCTTTCTGGTGAGATTCCATCTGAGATAGGTAATTGCTCTGAGCTTGTTGAGCTGAGGCTATGCAAAAATAATCTATCAGGTTCTATTCCATCTGATATAGGGAAGCTTCAGAAGCTACAGGTTTTGAGTTTATGGAATAATTTTATTGTTGGGGCTATTCCTGAAGAGATTGGTAACTGTACAAGCTTGAGAACGCTCGAGCTTTCTTTGAATTCTCTATCTGGGACCATCCCCTTGTCTGTGGGTAATCTTATGAAGCTTGAAAACTTTTTGGTTGCTGAAAACAATATCTCTGGTTCTATACCTTCAACTCTTTCAAATGCCACAAATCTGCAAAGATTGGAACTTTACATGAATCAAATCTCAGGTTTGATCCCACAGGAGCTTGGGAGGTTGACAAAGCTCACTCAGTTCTATGCTTGGGACAACCAGCTTGAAGGAACCATCCCTTCTACTTTAGCCAATCTCAGTAGCCTCCAAAAGCTTGATTTGTCCATGAATTTATTTATTGGAAGCATTCCAAAAGGTCTCTTTCTGCTTCAAAACCTCACAGGGTTGGATATTATTTCCACTGATATATCAGGCGCAATTCCACCGGAGATAGGAAGTTGCAGCTCTCTTGAAAGGCTGAGTCTTAGAAACAATCGAATTTATGGTCAGATTCCAAAGACAATTGGTGGTTTGAAGAACTTAAATTTGTTTGACATCTCTAATAATTACCTGAACGGGTCATTGCCTGATGAGATTGGTGGCTGCTCAAAACTGGAAAAGATAAACCTTAGCAACAATGTATTAGAAGGTCCACTGCCTGAGTCACTGTCAACACTACCCAATCTTTCAGTTTTGAATGCATCTATTAATAAATTTGAAGGTCAGATACCTACAAGCTTAGGTAATCTTTCTTCCCTAATTGATCTGATACTGAGCAGAAACAAATTCTCAGGAACCATTCCTCAATCACTTGGTCTGTGTTCAAAACTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGAAGCATACCAACAGAGTTAGGTGATGTCAAAACTCTTGCAGTTGTTCTTAACCTCAGTCACAACTCTCTTAAAGGATCAATTCCTTCCGAAATCTCTAAATTAAACATGCTCTCAGAGATGGATATTTCACATAATATGTTGGAAGGAGGTTTGCAGCCTCTTTCTCACCTTGCAAGTCTTGTTTCTCTCAATATTTCTCACAATAACTTCACTGGCTATCTTCCTGACACTAGGATTTTTAGACACTTATCACCAGAAGAAATTAAGGGAAACAGTGGCCTTTGTTCTAGGATTCAGGATTCATGCTTCTTAAAAGATCACTCACGCAGGGAAAAACTGGCTGAAAACATGAACTCAACAATTCTTAAGCTGATAATCGGATTGCTGGTAGTCTCGATAGTGATATTTATTGTTACAGTAATCATTTCAGTTACCAGAAGAAGAACAATCAGAGACAGTAATAATGGTTCTTCAGAAGAGATGGGAAACGCATGGAGATGGCAATTCATTCCATTTCAGAGGTTAAATTTCTCAGTTGAGCAGGTACTCAGAAGTTTAAAAGACGAAAATATAATAGGAAAAGGATGCTCAGGGGTTGTGCATCGTGTTGATATTGGTAATAATGAAGCCATAGCCGTGAAGAAATTGAGGGCAGCAACGGCTCCAATGGTTTCAGGTGGTGATGGACCCAATAATAATGATGACCCATTCACGAGAGAAATGAGAATCCTGGGTTTAATCCGACATAGGAACGTTGTGAGACTCCTAGGATGCTGTTGGAGTCGAACCACAAGATTGCTTATGTATGAGTATATGCCAAATGGGAACTTAGGCAGTCTACTTCAGGAGAGGGATGAAGAAAATTCTTGTTTGGAATGGGGAGTGAGGTACAAAATTTTGTTGGGTGCTGCACAGGGCCTTGAATATCTTCACCATGATACAGAACCTCCAATAGTTCACAGAGATATCAAAAGCAGTAACATTCTCATTGGCCCTGAATTTAATGCTTGCATTGCTGATTTTGGCTTGGCTGAGTTCGTTGACGATTGTGGTTTCGGAAACTCCTCCGGTATAGTCGCTGGTTCTTGGGGATATATGGCTCCTGAGTATTGCTACATGACGAAGATAACTGAGAAGAGTGATGTGTATAGTTTTGGTGTAGTGATGCTGGAAGTGCTGACAGGGAAGAAACCGATTGATCCCAGCATACCTGATGGGTTACACGTTGCTGAGTGGGTGAGACAAAACAGTGAACAAGTACAAGTCCTAGACCCTACCTTGCAATCTGCACCAGAATCGGACATAGAAGAAATGAAGGAAGCATTAAGCATTGCCCTATTGTGCTTAAGTTCTGCCCCGGATCAAAGACCTACAATGAGGGACGTGGCAACCATGATCAGGGAAATTAAACCAGTGAATGAGGAATATGCTGATTTTGATGCCCTTTTAAAGGATTCTCCTACAACACTTACTGGGGCTGCTGCAGAATCTTCTTCACAAGCACATGCAGCACTAAGCTTGTACCTTATGAAAGGAAACAAAGCAAGCCCCTCTATTCTATCTTCACCAAGAAGATCATCTTTTTCTATAGTTGAATTGAGCTAG 3372 0.4128 MKQILVFFFSVVVITLFLCTTLAFSYNHEAFLLYSWLHSSPSPPPSHFSNWNIRDRNPCNWTSITCSRQGFVTKINVSSVHLDLPLPSNLSSFRFLRKLVIPNANLTGTIASDIGACSSLTVIYLSHNSLTGSIPASVGNLPNLQILALNSNFLGGEIPNELSNCIGLKSLFLSNNQLGGTIPSSLGKLSKLENFRAGGNNNVTGNIPHELGNCINLVSLGLTETRISGSLPASLGRLKKLQRLSLCDTMLSGEIPSEIGNCSELVELRLCKNNLSGSIPSDIGKLQKLQVLSLWNNFIVGAIPEEIGNCTSLRTLELSLNSLSGTIPLSVGNLMKLENFLVAENNISGSIPSTLSNATNLQRLELYMNQISGLIPQELGRLTKLTQFYAWDNQLEGTIPSTLANLSSLQKLDLSMNLFIGSIPKGLFLLQNLTGLDIISTDISGAIPPEIGSCSSLERLSLRNNRIYGQIPKTIGGLKNLNLFDISNNYLNGSLPDEIGGCSKLEKINLSNNVLEGPLPESLSTLPNLSVLNASINKFEGQIPTSLGNLSSLIDLILSRNKFSGTIPQSLGLCSKLQMLDLSSNELTGSIPTELGDVKTLAVVLNLSHNSLKGSIPSEISKLNMLSEMDISHNMLEGGLQPLSHLASLVSLNISHNNFTGYLPDTRIFRHLSPEEIKGNSGLCSRIQDSCFLKDHSRREKLAENMNSTILKLIIGLLVVSIVIFIVTVIISVTRRRTIRDSNNGSSEEMGNAWRWQFIPFQRLNFSVEQVLRSLKDENIIGKGCSGVVHRVDIGNNEAIAVKKLRAATAPMVSGGDGPNNNDDPFTREMRILGLIRHRNVVRLLGCCWSRTTRLLMYEYMPNGNLGSLLQERDEENSCLEWGVRYKILLGAAQGLEYLHHDTEPPIVHRDIKSSNILIGPEFNACIADFGLAEFVDDCGFGNSSGIVAGSWGYMAPEYCYMTKITEKSDVYSFGVVMLEVLTGKKPIDPSIPDGLHVAEWVRQNSEQVQVLDPTLQSAPESDIEEMKEALSIALLCLSSAPDQRPTMRDVATMIREIKPVNEEYADFDALLKDSPTTLTGAAAESSSQAHAALSLYLMKGNKASPSILSSPRRSSFSIVELS 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0336 1123 SMART LRR_typ_2 238 262 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 286 310 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 166 189 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 141 165 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 550 574 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 478 502 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 646 671 IPR003591 -
Lele21g0336 1123 SMART LRR_typ_2 406 430 IPR003591 -
Lele21g0336 1123 FunFam LRR receptor-like serine/threonine-protein kinase 527 599 - -
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 513 603 IPR032675 -
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 325 423 IPR032675 -
Lele21g0336 1123 SUPERFAMILY Protein kinase-like (PK-like) 756 1055 IPR011009 -
Lele21g0336 1123 SUPERFAMILY L domain-like 35 395 - -
Lele21g0336 1123 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 861 1073 - -
Lele21g0336 1123 SUPERFAMILY L domain-like 375 702 - -
Lele21g0336 1123 Gene3D Phosphorylase Kinase; domain 1 760 860 - -
Lele21g0336 1123 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524
Lele21g0336 1123 Pfam Leucine rich repeat N-terminal domain 35 67 IPR013210 -
Lele21g0336 1123 Pfam Protein kinase domain 777 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 185 324 IPR032675 -
Lele21g0336 1123 FunFam Nuclear pore complex protein NUP107 26 184 - -
Lele21g0336 1123 SMART serkin_6 775 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0336 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
Lele21g0336 1123 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Lele21g0336 1123 Gene3D Transferase(Phosphotransferase) domain 1 861 1073 - -
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 604 692 IPR032675 -
Lele21g0336 1123 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Lele21g0336 1123 ProSiteProfiles Protein kinase domain profile. 775 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0336 1123 Gene3D Ribonuclease Inhibitor 424 512 IPR032675 -
Lele21g0336 1123 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 537 1050 - -
Lele21g0336 1123 FunFam Putative LRR receptor-like serine/threonine-protein kinase 604 689 - -
Lele21g0336 1123 Pfam Leucine rich repeat 96 152 IPR001611 GO:0005515
Lele21g0336 1123 Pfam Leucine rich repeat 456 515 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0336 Lele-ChrLele21 2211334 2215360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0336 24 1071 Receptor kinase-like Gene Family AT5G56040 43.638 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele21g0336 Pkinase 4.2e-41 CL0016