Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0331 ATGGGAAAGCAACAACTCTCACTGATTATTATAAGACAATTCAAGGCTGCTGTGAAGAAGATGAAGTTGCTGTTAGCTCTGTACGGGCGAGTCCATTCACGTGTGGGACGTCATACAAGCTCAAAGTTATTACAGAGATGGCGAAGCTTCACTTATGGAGGATCTGAAAGAAGAGTGAGAGGAAGAAGGAGGCGTTACTATTATGGGTGGGACGAGGAAGACGATGATATCAACCAAAGGGCAGAGAATTTCATTGCTAGCTTCCGCCATCAACTAAACTTGGAGAGACAGATGGAGCAAAGGTGTTGCTCAAGTTCTGGTTTTGAGGATGACTATAATCATTTTGCCACCATGAATAGTGAGGCTCCAGGCACTCAAAGCCAATGGCTTAAAGGTGTAGTAACTATGGCCGGTTCAAACGATGGAATCCTTTTAGACAGCAATGAAGACAATATATGTTCGCAGACAGGTGAAGAATTTTCAACTGAATTCTATCGTGATCGGTTTGGTTTAAGGAGAATTACTGTCACAAGTGATGTGGACAATAACCCGCCAAATATATTGGATTCTGATTATAATCAGAACTATCAGGTGGTTTATGAGGATCTTGCACGCGTTGTTGGCGTGAGGAGAATGGATTCTGATAGTAACTCGGATTTGTCAGATGTCGCTGCAACAGCAGGATACGTTGCAGAGCCTAACAATTTGAACAAATTCCAGTGGGAACAGGGTGGTATTGGACAACGATCTCGTAAATTTACTGAAGAAATTTATTTGGATCCAGTTTCTTCATCAGGACCAACTGCTCCACCAATTTATGCAGCTGAGTCCCTTCAGTCATGTCATCCTTCTCCGTCAGCATTTTCGGATGCTTCATTTTATAAGAAGATAAAGTTTCTTTGTAGCTTTGGAGGGAGAATATTACCAAGGCCAAATGATGGGAATCTCAGATATGTGGGAGGAGAAACACGGATTATATCTATAAGGAAAAACATTACTTGGGAGCAACTTATGGAGAAGACTCATGCAATATGGAACCAATCTCACATTATCAAATACCAGCTTCCTGGAGAGGATCTGGACGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTCATCATATGATAGAGGAGTATGAAGAACTTGAGAGAATTGGAGGCTCTCAACGATTGCGGATATTTCTCATATCTTCAAGTGAACCTGAGAACCCAAACTCTAGTATTGAAGCAAAAGTCAATCTGCCAGGTGATGTTGACTATCAGTATGTCGTTGCTGTTAATGGCATGCTGGAACCAAGTCCTCGGATAAACCAAACAAGCCAGTTTGGGAATACCTCTGATTTCAGCAGTCCAAGATTTTTTAAGGAATCACCTGCATCTGCATATGCTTGGGATGTGAAGGATCTCAGTCCAATGTCCCCTCGTTTGGGAGGATTGCTCAATAAAGCTGGTTCTCAGTTTTTAACAGGCAAATCATTCAGTCAGTCACCACCTAGTCCTATGTCCCGTATTCGTGCTCCGACTAAAGATCATCTAATTTCCAACGTAGAGCTGATTATGGATCAACAATGCAATGCTGGTAATGAAGGCCTTGTTCCCTTTGTGAAGCAAGGAATTCAAAGTGGTAATTCCTTGTGTAGAGATGATGCCCGTTATGTTGATCCAGCTGCATACTATAACAATCTAGCCCAAGGCCCTCCCATGAGCCTCAGTGAGGGTGTTCAATATCACGTGAGAAGGCACAGTGAAAACTTTGTCTCTTCTGCACCGTGTGGTCAAGGTGATATGATATTTGAGAGACACCCACGTACAAATGACAAGAATCTCTCTCATCCTGAAGGGTCACCATTAGTAATTCCAGTCTCTAATGATAGAGATAGAGAGAGGTTTCATTGCAGATTGTTGCATGCACTTTCTGACACAATGTTGCAGAGTGATGAGAGGTTTGAAGATCATTTTCAGCCCTCCCTTAAAGTAAAGGGAAACAAGTCACCCTTACTGCAATTTTCAAGTTCTTCCCGGGAAAGGCCATTACAGGAGGGAGAGGTAATTGATGAAAAAAACCTGGTGGCTCAGTATCAAATTCCGCCCAGTTATGGAAAAACTGGCAGTTTCAAGGGGATTTTGAATCCTAGTCAAGGGAGCTTGCAACTTGCAGATAATACCAATGCCTGTTCTGGTGAAATTGGAAGATGTGGAGGTAATATTGAAGTTACATCACATGAAAATGCCTTGCATATCAAAGATTTGCAGGGCATCAATTACAAACAAGTTGGTTGCCAGTTTTCAGTAGAGTTACAAAGCAGTGAATGCAAATTACCTGCTTCTTCATTAAAGTATGAATCTACAAGAAACCTGAGGGAGCAAACACATGGTCTGCCACTAGACATGGCTGCTTCTGAGTTTTTAATGAGAAGCCAAAATTCTGCAGTGTATGAGCAATTTACCATGTCGACAACTGATAACAGCGAGTCATCTCACCTTGGATCCTCTGATTTACAGCTTATTGACTCCCAAACTGACATAAAGTCCACACTTCTAGCCTCTAAGAATGACAAGATTGTCTATGACCAACATTCTTTGGTTGGGTATAACATTGAGTTATGTGACCAGTCACAGTGCACTGTTGCTTTGAGAAAAATCAAGCAGCTAAATGCAGCAGCTATTGTTAAAGGGCCAACTGATAGTTGTTCTTCAGGCATAGATGAAGATGAAGAGGATGAATCTGAAACTGTGTTTCATAAAAGGGAAGAGACGGAAAGTGCCAGTCCAGAATCTCAAAGTGAGTTTGTAAAAGTTGATAGTAGAAACTTCAAGAAGTCAATTAGATCAGCAACTTCTGAACTAGAGGCTGAACTCTATGGTTTGCAGATTATTAAGAATGCTGATGTTGAAGAATTGAAAGAGCTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGATCAGATGTTGCAATCAAGAGGATAAAAAGTAGTTGTTTTTCTGGCAGATTATTAGAGCAAGAGCGGTTGACAAGAGAATTCTGGCGAGAGGCAAAAATTTTGTCAACTCTTCACCATCCAAATGTGGTGGCCTTTTACGGGGTAGTTCCAGATGGACCGGGTGGGACATTGGCGACTCTAACAGAATATATGGTACATGGATCACTGAGGAATGTCCTCTTGAAGAAGGAAAAAGTGCTTGACCGCCGAAAACGGCTTATGATTGCAATGGATGCTGCCTTTGGCATGGAATATTTGCATTTTAAGAATATTGTTCATTTCGACTTGAAGGGTGATAATCTACTTGTCAATTTGGGGGATCCTGAACGGCCTGTTTGCAAGGTTGCAGATTTTGGGCTATCAAGAATTAAGCGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCCTGGATGGCACCAGAATTATTAGATGGCAACAGTAGTGGGGTCTCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAGATCTTGACTGGGGAAGAGCCATATGCTAGCATGCACTGTGGTGCCATCATAGGTGGAATTGTGAACAATACACTCAGACCTCCAATCCCAAAATGTTGTGATTCTGAATGGAAGAGGCTGATGGAAGAATGCTGGAGTTCTGATCCTGCAGCCAGGCCATCCTTCACAGAAATAACACAAAGATTTCGCCTTATGCAAGCGGCTCTGCCCCCCAAGAAGAAACACAATCCTCCAACTTGA 3735 0.4222 MGKQQLSLIIIRQFKAAVKKMKLLLALYGRVHSRVGRHTSSKLLQRWRSFTYGGSERRVRGRRRRYYYGWDEEDDDINQRAENFIASFRHQLNLERQMEQRCCSSSGFEDDYNHFATMNSEAPGTQSQWLKGVVTMAGSNDGILLDSNEDNICSQTGEEFSTEFYRDRFGLRRITVTSDVDNNPPNILDSDYNQNYQVVYEDLARVVGVRRMDSDSNSDLSDVAATAGYVAEPNNLNKFQWEQGGIGQRSRKFTEEIYLDPVSSSGPTAPPIYAAESLQSCHPSPSAFSDASFYKKIKFLCSFGGRILPRPNDGNLRYVGGETRIISIRKNITWEQLMEKTHAIWNQSHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERIGGSQRLRIFLISSSEPENPNSSIEAKVNLPGDVDYQYVVAVNGMLEPSPRINQTSQFGNTSDFSSPRFFKESPASAYAWDVKDLSPMSPRLGGLLNKAGSQFLTGKSFSQSPPSPMSRIRAPTKDHLISNVELIMDQQCNAGNEGLVPFVKQGIQSGNSLCRDDARYVDPAAYYNNLAQGPPMSLSEGVQYHVRRHSENFVSSAPCGQGDMIFERHPRTNDKNLSHPEGSPLVIPVSNDRDRERFHCRLLHALSDTMLQSDERFEDHFQPSLKVKGNKSPLLQFSSSSRERPLQEGEVIDEKNLVAQYQIPPSYGKTGSFKGILNPSQGSLQLADNTNACSGEIGRCGGNIEVTSHENALHIKDLQGINYKQVGCQFSVELQSSECKLPASSLKYESTRNLREQTHGLPLDMAASEFLMRSQNSAVYEQFTMSTTDNSESSHLGSSDLQLIDSQTDIKSTLLASKNDKIVYDQHSLVGYNIELCDQSQCTVALRKIKQLNAAAIVKGPTDSCSSGIDEDEEDESETVFHKREETESASPESQSEFVKVDSRNFKKSIRSATSELEAELYGLQIIKNADVEELKELGSGTFGTVYHGKWRGSDVAIKRIKSSCFSGRLLEQERLTREFWREAKILSTLHHPNVVAFYGVVPDGPGGTLATLTEYMVHGSLRNVLLKKEKVLDRRKRLMIAMDAAFGMEYLHFKNIVHFDLKGDNLLVNLGDPERPVCKVADFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSGVSEKVDVFSFGIAMWEILTGEEPYASMHCGAIIGGIVNNTLRPPIPKCCDSEWKRLMEECWSSDPAARPSFTEITQRFRLMQAALPPKKKHNPPT 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0331 1244 SUPERFAMILY CAD & PB1 domains 313 402 - -
Lele21g0331 1244 SMART serkin_6 964 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0331 1244 PRINTS Tyrosine kinase catalytic domain signature 1154 1176 IPR001245 GO:0004672|GO:0006468
Lele21g0331 1244 PRINTS Tyrosine kinase catalytic domain signature 1198 1220 IPR001245 GO:0004672|GO:0006468
Lele21g0331 1244 PRINTS Tyrosine kinase catalytic domain signature 1083 1101 IPR001245 GO:0004672|GO:0006468
Lele21g0331 1244 PRINTS Tyrosine kinase catalytic domain signature 1046 1059 IPR001245 GO:0004672|GO:0006468
Lele21g0331 1244 Gene3D Phosphorylase Kinase; domain 1 957 1051 - -
Lele21g0331 1244 ProSitePatterns Protein kinases ATP-binding region signature. 970 991 IPR017441 GO:0005524
Lele21g0331 1244 Pfam PB1 domain 312 395 IPR000270 GO:0005515
Lele21g0331 1244 PANTHER SERINE-THREONINE PROTEIN KINASE 341 1228 - -
Lele21g0331 1244 MobiDBLite consensus disorder prediction 893 928 - -
Lele21g0331 1244 MobiDBLite consensus disorder prediction 909 923 - -
Lele21g0331 1244 SUPERFAMILY Protein kinase-like (PK-like) 947 1225 IPR011009 -
Lele21g0331 1244 Pfam Cotton fibre expressed protein 74 98 IPR008480 -
Lele21g0331 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1052 1242 - -
Lele21g0331 1244 Gene3D - 317 398 - -
Lele21g0331 1244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Lele21g0331 1244 SMART PB1_new 311 398 IPR000270 GO:0005515
Lele21g0331 1244 ProSiteProfiles Protein kinase domain profile. 964 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0331 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 316 398 - -
Lele21g0331 1244 Gene3D Transferase(Phosphotransferase) domain 1 1052 1241 - -
Lele21g0331 1244 CDD PB1_UP2 300 396 - -
Lele21g0331 1244 CDD STKc_MAP3K-like 970 1227 - -
Lele21g0331 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 957 1051 - -
Lele21g0331 1244 Pfam Protein tyrosine and serine/threonine kinase 966 1226 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0331 Lele-ChrLele21 2173296 2181134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0331 155 429 MAP Kinase Kinase Kinase AT1G16270 40.433 6.11e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele21g0331 PK_Tyr_Ser-Thr 1.7e-61 CL0016