Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0329 ATGGTGAGCGTTGATGAGATCCGCAATGCCCAGAGAGCAGAAGGGCCGGCCACCGTGATGGCCATCGGAACGGCCACTCCACCGAACTGTGTTGATCAGAGTACATATCCTGATTACTACTTCAGAATCACTAAAAGCGAGCACAAGACCGAGCTCAAGGAGAAATTCAAGCGCATGTGCGAAAAGTCAATGATCAAGAAGAGATACATGCACTTGACTGAGGAAATCTTGAAAGAGAACCCAAACGTCTTTTGCTTTTTTCTGGGCCAAGACGGATCATTTTCCTTTGCTGAAAAAGGATTTTTGTTTACCCGATGCATGCCGGTGAGTGAACCGACCCGACATCTGTCCGAACACCAGATTGTTGCAAGCGATGGTGTTCCGCAATGCACACACACATCCATTGGCGAATCGATTCAGGAAGAAAATATGGAGGATATTGACATTGATCAAATTGTGGATGTTCCTGACACTCCTGATAGATTGACTGCTAGGGTTGGTCGAAAATATGCTGACAATCCTGATGTTTATGTGAATGAGAAGGGAGAGAGGGTTCCCCCTTTTACTGAAAACAGTAAAAATGGAAGATTTCCCTTTTGTCTTTCAAAAAGCTCAAACGGTGGTGAAATGAATAGCTGCATAGCTGCATCCTCATCAAATAATTCTTATGCCTGTCAAAATGCTCCCCTATTTAGAAGGTCCCAATCTGACAAATCTTTTAGTAGAGAGTTCGCTTACACTGCTGGATCTGAAAAGATGGAGAAAGGGAATAATATAGGCCCTAAATTTCCTTCTAAATCATCTTCCAGTGGCTATGGGGGTGTTACTGTGTTTGATTTGACTGAAGAAAATGGGCAGCCCCAAAAACTCAGACCATTTTTCTCACATCATGAATTGAAGGATAATGCAACTGACACCAAGAAAGATGAGAAAGCAAGCATTGGGAACTCTCCTATATCTTGCATCCCTGATTCTTCAAATACATCTAGCAATGCCTTACGAGGAAAGTGTAAAATAGATGATAAAACACAACCATGCTCGAATATAACTGTTGATCGTGGAAAGAGTATTGACCTATCTCATGATTCTCAGCAAAAAACTGAAAAGCAGTCGTTGTCTCCACGCCTTATAACTGCCCCAAGATTCAGAGGGCAGAAGCGATTGGTGCGAAATGGCTGTATCTCACCTTATAATATTGCAGCTAGAGCAAAACAATCAGCTGAACAGAATGATGTTGAACAGAGCCATGCGGAGGATGATGTTTCTAGCAATACAACGTCCCACATGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTAACAGAGTGAAGGGAGAAGAATTTTTTGTCCACCCTTCGAGTGTGCATGATGCCAGAACTATCAAAACAGCTAGCAGCAGCCCGAAGGATAATCATGGAGAGACGGATGGTACCAGCGATGCTATCAGAAATTCACATGAAAGTTTTGGGGGATCAGAAGGTTTGACAATAACACGTAACTGCAGAACTACTCATTGGCCCTTGCATGATGTAACTGGGCATCATTCAAGAAGAGGTGAAGATTCTGAAAGATTTATTAGCACACGATGTAGGAACGGAGTGGGTAGAAGAGGCACTGGGAGCAGTCAAAACACTATGGATGTAAGGTATCCTCTGGTAAATCATGCGACTTCTCTGATCATTCCTGATGCTGAACAGTCAACTAGACCTTGTAATACAGCAGACAAGCTGACTAAAAGGCAAAGGAAAAACTCATCAACTTCTACAAATCTTAATCCAGAGATTATGATTCTTGATTCACCTGGGGAATCATCAAACTTAAGCTCACCTAGAAGCTCTGAAGTTGTTGAGCAATTACCTGGAACAACATACACACACAGAGCATCCCATGATTCCGATGACATGAATCCTAGTGACTCATATACTCGGGCTAGACAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTCACGGGGGAGAGCATATTGATGAGCATTTAGCATGGGCATTGCAACATGAGGAGGAACTTCTGCATACATCTACTGAGAGTCACCATATGTCACGCCCTAGATGGTTGTCAAGGGAAGCCTCAAATAGACAGCCTCGTTCCCGGTCCCATCAAAGTCCTACAAATAGAAGGAGAGCTGCGCCTCATGCCCCTCCCTCTAATAGAGTGTCACAGTTGAGGAGTCGCTTTTTAAATCGGTCTTCAGTGCCTGCTGCCATCCCATCTAGAGGAAGGCGTCTTCGGTTTCCTGTGGATATGGACTTTGACATGAGACTTGATATATTGGAAGCATTGGAGGATGCAGTAGGGGATATTAGCGACATGGGAATTGCTGAAGACATGTTTCAAGCTCATCGAGACTTCAATGAAAATGATTATGAAATGTTATTGGCCCTTGATGACAACAATCATCAACATGCCGGTGCATCTGTCCATCAGATCAATAGTTTGCCACAGTCCACTATACAGACTGATACCTTCCAAGAGGCGTGCGCCATATGTCTTGAGATTCCAGCTATGGGAGAGACCATTCGCCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCGTAGAAGGACCTCTTGCCCAGTGTGCAAGTCATCTATAACATAA 2673 0.4343 MVSVDEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITKSEHKTELKEKFKRMCEKSMIKKRYMHLTEEILKENPNVFCFFLGQDGSFSFAEKGFLFTRCMPVSEPTRHLSEHQIVASDGVPQCTHTSIGESIQEENMEDIDIDQIVDVPDTPDRLTARVGRKYADNPDVYVNEKGERVPPFTENSKNGRFPFCLSKSSNGGEMNSCIAASSSNNSYACQNAPLFRRSQSDKSFSREFAYTAGSEKMEKGNNIGPKFPSKSSSSGYGGVTVFDLTEENGQPQKLRPFFSHHELKDNATDTKKDEKASIGNSPISCIPDSSNTSSNALRGKCKIDDKTQPCSNITVDRGKSIDLSHDSQQKTEKQSLSPRLITAPRFRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQSHAEDDVSSNTTSHMSINDIVAEERSSNRVKGEEFFVHPSSVHDARTIKTASSSPKDNHGETDGTSDAIRNSHESFGGSEGLTITRNCRTTHWPLHDVTGHHSRRGEDSERFISTRCRNGVGRRGTGSSQNTMDVRYPLVNHATSLIIPDAEQSTRPCNTADKLTKRQRKNSSTSTNLNPEIMILDSPGESSNLSSPRSSEVVEQLPGTTYTHRASHDSDDMNPSDSYTRARQVEADEILARELQEQLYHEDSFHGGEHIDEHLAWALQHEEELLHTSTESHHMSRPRWLSREASNRQPRSRSHQSPTNRRRAAPHAPPSNRVSQLRSRFLNRSSVPAAIPSRGRRLRFPVDMDFDMRLDILEALEDAVGDISDMGIAEDMFQAHRDFNENDYEMLLALDDNNHQHAGASVHQINSLPQSTIQTDTFQEACAICLEIPAMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSIT 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0329 890 MobiDBLite consensus disorder prediction 348 373 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 459 473 - -
Lele21g0329 890 Pfam Chalcone and stilbene synthases, N-terminal domain 5 84 IPR001099 -
Lele21g0329 890 Gene3D - 1 167 IPR016039 GO:0016746
Lele21g0329 890 SMART ring_2 845 885 IPR001841 -
Lele21g0329 890 MobiDBLite consensus disorder prediction 483 497 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 628 643 - -
Lele21g0329 890 Pfam Ring finger domain 844 886 IPR001841 -
Lele21g0329 890 CDD mRING-H2-C3H2C2D_ZSWM2 845 886 - -
Lele21g0329 890 FunFam RING/U-box superfamily protein 810 890 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 293 330 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 691 713 - -
Lele21g0329 890 SUPERFAMILY RING/U-box 844 889 - -
Lele21g0329 890 ProSiteProfiles Zinc finger RING-type profile. 845 886 IPR001841 -
Lele21g0329 890 MobiDBLite consensus disorder prediction 405 432 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 584 627 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 565 643 - -
Lele21g0329 890 SUPERFAMILY Thiolase-like 1 89 IPR016039 GO:0016746
Lele21g0329 890 MobiDBLite consensus disorder prediction 293 312 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 691 742 - -
Lele21g0329 890 MobiDBLite consensus disorder prediction 456 497 - -
Lele21g0329 890 PANTHER SI:CH211-59O9.10 517 890 - -
Lele21g0329 890 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 811 890 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0329 Lele-ChrLele21 2157815 2166096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0329 144 890 C3H Transcription Factor Family AT1G04790 31.714 8.19e-81 272