Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0326 ATGGACTTGGATATGGACATTCCATTTCCAGAGGAGGTGGAATTGCTGGAATCCAATGCTCGTCTTCTCGAAGACTACCCAGATCTGGAGCCACCGGAGCCCTACCCGTACGAAGACCAAGAAGCGCCATCAGCAGAACAACCACCATCATCCCCAGATCTTCAATTCGACTCTGAAATACAAGTCACCTGCCACAAGCGGTCGAGGTCGGTTAGTCCGAATGGATCACTTTCAGAAGATGTGGAGCTGTCAGAGGAGAAAAGGTGCAGGACTGATGAGACAGCGCGGGCGACTGACGAGGACTGGCTTCGTTACTCACCAACCAAGGGTAGCGAGTCTGAAGTGGCAGAGCAAGCGAGCTTTGTGAAGGAGAAGATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTCTAGCGATCACTGCACCCAACGGGGACAGGGTTTATGCGAAGTTAGCTAGGTTGGAAGGGGAGGAACGGTTGAAGAAACTGGATGTGGGAACAAATTCTGATGGTCTTATATCAGAACCCATTAATATTCTATTTGAGAAATTGGATCAAGAGGCTTTCACTAAGACATTGAAAGCTAGTTCAGAATGCCAAAATGTTCTGGATGTTCCTGAAACACCAGTTGTCCATGAGCAACTTTGGGTAGATAAATATACCCCAAATTCATTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTGTGGTTGAAGCAATGGGATTCTAGTGTATTTGGATCTGAGATTTGCAGTACATCAGATGAAGTTTTGTCTGCTTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAACCTTTAGATTCAAAATTTCAAAGAATGGGTGGAGGCCCCAAATGGAGTAACAAGAGATATAGTCATTCTAAAAGTATGGATGAAAGTGGTAATTCAAAGAGCATTCAGGATATATTGAATAGGAAAGCAAAGCATACTGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCTCCCGGTCTTGGAAAAACTACACTTGCACATGTAGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCTAGTGATGATCGCAGTACATCAACAATTGAATCTAAGATCCTTGACGTGGTTCAGATGAACTCTGTCATGTCTGATTCAAGACCAAAATGCCTGGTGGTGGATGAAATTGACGGGGCACTTTCAGATGGAAAGGGTGCTGTAGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGATGCGGGAAAGGAAAATTTGGTGAAAGAGCAATCGGGAAGGAGATCCTCGAAGAAGGGACAAAAGAAAGCGTCATTGTCAAGACCTGTAATTTGCATTTGCAATGACCTATATGCCCCCGCCTTGAGACCATTGCGTCAGGTAGCAAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGTGTTGTAAACAGGATCAAGTATATATGTAACAAGGAGGGGATGAAAGCTAATGCCATTGCACTTACCGCCCTAGCAGAATATACAGAATGTGATATACGCTCATGCTTAAATACCCTCCAATTTCTCAGCAAGAAGAAAGAAACCCTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACATTTGGAAGGAGGTTTTTCAAAGGAAAAAATCCAAGACAGAAAGAAAGTCTCACAATAGCATGCTTTTTGAAGTTAACTCCTTGTACTCCCTTGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAGTGCATGAAAACATTTTACGGCTCAGTTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTTGGAGTTTCTGATCTACTGCATCAATATATCATGCGCACACACCAAATGCCCCTTCAGGTTTACTTGCCACCCGTAGCAATTACTGTACATCGACTGGTAGCTCAAATTCAGAAGCCAAACATTGAATGGCCAAGGTCCTACCAAAGGTATCGAACGATGATGGAAGAAAAGATGGACATTTTGAACACTTGGCACCACAAAATTCCGCCATATATTGCTAGGCACTTATCAGCAAGTTCCTTTGTTGAAGACTTAATTTCTCCATTATTACGTATTCTGTCCCCTCCGACTATAAAACCGGTGGCATTGCAATTACTGTCTGATAAAGAGAAAACTGATCTTGCTCAATTAGTTAGCACAATGGTATCTTACTCTGTAACATATAAAAACACGAAATCAGATATGCTGCCTAATAGCCTGAGACATGAAGTAGCTGATCACTTAACATTATCATTTGATCCCCCAATCCGTGACTTCATCAATTTTAAGGATCATACCTCAAATCATTATGTGCTTGCTCTACCTGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTTAAGACTGATAGGCCTTTAGGAAATAGAAGTAGCAGTGGAAGGCCTGAATTCATTGAGGCTGGAACTAGCAACGCCCAATCATCCAAAATCAATCACGCAGATGCAATTTCTGTTAAAAACATTCAAAACGAAAGTAATGCCACAAAAGCAAGGAAAATTAATGCAAATTCCACCATAGTTTCACAGAATTCGCATCCTGATAATGGGGCAGCGGACAATATGAAATCGCAAAACACAGGAAGGATGAGAATCCCATCCGGCGGTTCCTTCTTTGACAGGTTTAGAAAGTCGAATAATAAAGGTTTTCAAAGTGATGATAGAACTGAACAGAAAGAACCAATCTTGGAGAAAGCTCTACACCCATTACTGTTCAAATTTAACGAGGGCTTTACGAACGCAGTCAAGAGGCCTGTTCGTATTCGTGAATTTCTACTTTCCGATGATCTTAAAGGCAATGAGGGAAGACAAGCTTCACACAAGAGCACCCCTGTCTCGCTTTCAGACTTCCTCGACCGCAAGTTGCCGAAATCTTCTTTAGTCATTGGAAGTATTCAGGGGAAACCAACGCCTTTTTTATCTCCTCTGGGTTTAGGAATATCCGGAGTTAAAGAGACAAAGAGTATCAGTGATAGAGTGATTTTGGAGAAGTTCAAGCATAAGGATGAAGAAAAGGATTATGCTATCGGTCCTAGTGGTGTTAATGAGCCAGAAAATTCAGTCGAAGATGATATTCAAGACTCGAGGAAAAGAAAGAATCCATTTGTAGGTTTGTCCTCTTTTCCCTATGATTTAAAGCAGAAAGTCCTCAAGTTTGAGGATTTGTCCCCTGCAATGTTATTTCTCCGTTATTTTCTTGACAAATCAGTGGATATTGGACTAAGTGAGAACCAGACTGTTAAAAGGCAAGTTGTGATTCTTGGAGGTGAATCAACCAGAAGGCAAATAAGAAGAACTACTAATCGTTCTTCATGCAACAAAAGGCCCCAACCGCTTTACAATCACTGTATGTCTCATTTACATAAAAATGGCTGTGGATGGTGGGACTGTGACATGGAAGGTGTTGACAACGAGGAAGTCGGCTTCCATGAAGTATGGGAAGGGGTTGGGTCCACCTCACTTGGAGAGATAGTTGATTGGCATTGA 3585 0.4209 MDLDMDIPFPEEVELLESNARLLEDYPDLEPPEPYPYEDQEAPSAEQPPSSPDLQFDSEIQVTCHKRSRSVSPNGSLSEDVELSEEKRCRTDETARATDEDWLRYSPTKGSESEVAEQASFVKEKMLSRYASEIDGECLAITAPNGDRVYAKLARLEGEERLKKLDVGTNSDGLISEPINILFEKLDQEAFTKTLKASSECQNVLDVPETPVVHEQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSEICSTSDEVLSALKRHSTVVQNQKPLDSKFQRMGGGPKWSNKRYSHSKSMDESGNSKSIQDILNRKAKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVMSDSRPKCLVVDEIDGALSDGKGAVEVLLKMVSVEKKSDAGKENLVKEQSGRRSSKKGQKKASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVNRIKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLSKKKETLNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKSKTERKSHNSMLFEVNSLYSLVSSRGDYDLILDGVHENILRLSYHDPVMQKTVKCLNSLGVSDLLHQYIMRTHQMPLQVYLPPVAITVHRLVAQIQKPNIEWPRSYQRYRTMMEEKMDILNTWHHKIPPYIARHLSASSFVEDLISPLLRILSPPTIKPVALQLLSDKEKTDLAQLVSTMVSYSVTYKNTKSDMLPNSLRHEVADHLTLSFDPPIRDFINFKDHTSNHYVLALPVKQILVHEVEKQKILQVKTDRPLGNRSSSGRPEFIEAGTSNAQSSKINHADAISVKNIQNESNATKARKINANSTIVSQNSHPDNGAADNMKSQNTGRMRIPSGGSFFDRFRKSNNKGFQSDDRTEQKEPILEKALHPLLFKFNEGFTNAVKRPVRIREFLLSDDLKGNEGRQASHKSTPVSLSDFLDRKLPKSSLVIGSIQGKPTPFLSPLGLGISGVKETKSISDRVILEKFKHKDEEKDYAIGPSGVNEPENSVEDDIQDSRKRKNPFVGLSSFPYDLKQKVLKFEDLSPAMLFLRYFLDKSVDIGLSENQTVKRQVVILGGESTRRQIRRTTNRSSCNKRPQPLYNHCMSHLHKNGCGWWDCDMEGVDNEEVGFHEVWEGVGSTSLGEIVDWH 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0326 1194 MobiDBLite consensus disorder prediction 424 444 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 424 439 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 871 906 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 44 58 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 1040 1060 - -
Lele21g0326 1194 Pfam ATPase family associated with various cellular activities (AAA) 332 458 IPR003959 GO:0005524|GO:0016887
Lele21g0326 1194 MobiDBLite consensus disorder prediction 65 79 - -
Lele21g0326 1194 FunFam Chromosome transmission fidelity protein 18 479 546 - -
Lele21g0326 1194 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 959 - -
Lele21g0326 1194 SMART AAA_5 328 482 IPR003593 -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 818 840 - -
Lele21g0326 1194 CDD HLD_clamp_RFC 479 537 - -
Lele21g0326 1194 Gene3D - 215 477 IPR027417 -
Lele21g0326 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 534 IPR027417 -
Lele21g0326 1194 Gene3D - 479 549 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 80 95 - -
Lele21g0326 1194 CDD AAA 327 479 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 18 95 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 871 898 - -
Lele21g0326 1194 MobiDBLite consensus disorder prediction 282 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0326 Lele-ChrLele21 2104864 2118177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0326 329 537 Core DNA Replication Machinery Family AT5G22010 29.018 3.57e-14 75.5