Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0297 ATGAATGGTTCTGCAAGTTTCGAGGTAGAGGACTCTGAGTTAGTGGAAGTTGATCCCACTGGAAGATATGGAAGATTTAATGAAATTCTTGGCAAAGGGGCTTCAAAGACAGTTTACAGAGCATTCGACGAGTATGGAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTATGATTTTCTGCAGAATCCTGAAGATCTTGAGAGGTTATACTGTGAGATTCATCTTCTCAAGACCTTGAAACACAAAAACATCATGAAGTTCTATACTTCCTGGGTTGGTACTGCAAACAGGCATATTAACTTCGTCACTGAGATGTTCACCTCTGGCACTCTCAGACAGTACAGGTTAAAACACAGAAGAGTTAACATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGGAAGGTCTCCTTTATCTTCACAGTCATGATCCTCCTGTGATCCACAGAGACCTCAAATGTGATAACATTTTCATCAATGGCAATCAAGGGGAAGTTAAAATTGGTGATCTTGGCCTCGCTGCAATTCTCCGCAAATCTAACGCTGCTCGTTGCGTTGGCACACCAGAGTTTATGGCTCCGGAAGTTTATGAAGAGGATTATAATGAATTAGTTGATATATACTCTTTTGGAATGTGCATCCTGGAGATGGTGACATTTGAATATCCTTATAGTGAATGCACCCATCCTGCTCAAATTTACAAGAAAGTTGTCTCTGGGAAGAAACCAGAGTCTCTCTACAAAGTAAAGGATCCTGAGGTTAGACAATTTGTGGAGAAATGCTTAGCAACCGTGTCCCTTAGGCTTTCTGCAAGAGAACTTCTCAAAGACCCTTTTCTCCAACTTGATGATTACGGTTCTGAGATGAAATCACTTCGGTATCAAGGAGATTGCTATGAAGTAACCCCTTTATATAGACAACCTCTTAATGGAGTTCACTGCAGTAACCACTCAATCAATGAGTACACTGATTATCTCAGTGGTTATGGACCAGAATCTGAGCTAACGAGCGAAATCGATCTCTTTGAATGCGAAGAGGATGATAATTTCGCTGAAGTTGATACTGCAATCAAAGGCAGAAGAAGAGAAGATGATGGCATTTTCCTGAGACTTAGAGTATCAGATGAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTCGACATAGAGACTGATACAGCATTGAGCGTAGCTAATGAAATGGTGGCTGAGCTGGACATAACTGATCAAGACGTAACAAAAATAGCAGACATGATAGATAATGAAATAGCAAACTTGGTCCCACAGTGGCAAACTGGACCCAGAACAGAGGAAACTCCAGAATGGACAAGTGAAAGTCTCTGCTCCAACTGTGCTTCACGTGGCAACTTCTTTGATTATGTATCATCAAACACCCCATCAGCTAAGAAACTACAATTTCTTCATTGTTCAAGAGACGGCTGTGCCGCCATTCATGGCCGTTTCGAGGAGATCACGTACCAAGTTGAGGGGTCTGAAAATTGTAATACAGATGGTCCTCCAGCTGCTTCAACTCAATCTTCAGGTATTCGCTATACTGATATCTGGGCTCAGAGAGATGAACCGGCACCAAGTTCAGAGGAGTTAAGAGACATACGTAGTGACAAATCACATGAGGCATCAAACCAATCAAAAATTGAAGATGATCAAAGTAGTGTTATTGGGGATGATCAAAGTAATCCCAACTCAAAAGACACATTTTCTAGTCAGGAATTGGCTTGTGTTTTCCTGGACTATGAGAATGAAATTAGGCAGGAACTAAGATGGCTTAAAGCAAAGTACCAAATGCAGCTAAGGGAGCTTAGAGACCACCAATTAGGTGGAACACCAAAACTGGCAAGCACATCTCCTGAACCTGAAGAATCAGAAGAGCATAGGAAATATGGTGGGGTCCCAAAGCTACCAGTTACAACTCACATAAAGATACGGAACAACAAATCATTCTTGAGGCTTTTAAGCAGCAGGAAGCGATTTCCGGCTGATGCAGAGAAGAATAAGAAGTTCTCAGCTATGGCTAATATGGTGCAAGATGTAGATGAGATTAATAATCCTGAGCTGATGGTCACAGCCAACGATTTCTATTCTGGAGATTTGCTTCCACACTCACTACATAGAGCGACGTCTCTTCCAGTTGATGCAATAGATGCATAG 2172 0.4185 MNGSASFEVEDSELVEVDPTGRYGRFNEILGKGASKTVYRAFDEYGGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVGTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPESLYKVKDPEVRQFVEKCLATVSLRLSARELLKDPFLQLDDYGSEMKSLRYQGDCYEVTPLYRQPLNGVHCSNHSINEYTDYLSGYGPESELTSEIDLFECEEDDNFAEVDTAIKGRRREDDGIFLRLRVSDEEGRVRNIYFPFDIETDTALSVANEMVAELDITDQDVTKIADMIDNEIANLVPQWQTGPRTEETPEWTSESLCSNCASRGNFFDYVSSNTPSAKKLQFLHCSRDGCAAIHGRFEEITYQVEGSENCNTDGPPAASTQSSGIRYTDIWAQRDEPAPSSEELRDIRSDKSHEASNQSKIEDDQSSVIGDDQSNPNSKDTFSSQELACVFLDYENEIRQELRWLKAKYQMQLRELRDHQLGGTPKLASTSPEPEESEEHRKYGGVPKLPVTTHIKIRNNKSFLRLLSSRKRFPADAEKNKKFSAMANMVQDVDEINNPELMVTANDFYSGDLLPHSLHRATSLPVDAIDA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0297 723 SUPERFAMILY Protein kinase-like (PK-like) 26 282 IPR011009 -
Lele21g0297 723 CDD STKc_WNK 22 281 - -
Lele21g0297 723 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Lele21g0297 723 MobiDBLite consensus disorder prediction 525 573 - -
Lele21g0297 723 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lele21g0297 723 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Lele21g0297 723 Gene3D - 347 433 - -
Lele21g0297 723 MobiDBLite consensus disorder prediction 553 573 - -
Lele21g0297 723 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 629 - -
Lele21g0297 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lele21g0297 723 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 424 IPR024678 GO:0004674|GO:0005524
Lele21g0297 723 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Lele21g0297 723 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0297 723 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0297 723 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0297 723 MobiDBLite consensus disorder prediction 612 638 - -
Lele21g0297 723 MobiDBLite consensus disorder prediction 528 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0297 Lele-ChrLele21 1943039 1945876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0297 1 492 MAP Kinase Kinase Kinase AT3G22420 60.000 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele21g0297 Pkinase 1.9e-48 CL0016