Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0292 ATGGTATCCGCCTGTCTGGACACTTCTGTGTCTTCCTCTTTTATCTCACTCTCCTTCTTGCCATGCGGTCTCGCCCTTTCTCAGCCTCTCCATTTCTCGAGCTTCTGTTGCTTCTACTTCCCTCTCGGACACCTCTTTCCTCCGTCTCTCTTAACGCATTTTCCGCCGCCAAGAATGGCCGAAGCTTCATACACTGTGGCATCTGACAGTGAAACCACTGGGGAGGATAGGTCATCAGCTTTTCCTGAAGTAGCCATTGGAATCGATATTGGTACTTCGCAATGCAGTGTTGCTGTGTGGAATGGATCTGAAGTGGAGCTTTTGAAGAACACAAGAAACCAAAAGATTATGAGATCGTATGTGACTTTTAAAGATGACACCCCTTCTGGAGGAGTTAGCAGTCAACTCTCTCATGAACATGACTTGTTATCTGGGGCTACAATCTTCAACTTGAAACGCTTAATTGGAAGAGTTGATACGGACCCAGTTGTCCACTCAAGTAAAAATCTCCCCTTTCTGGTACAGACTTTGGATATTGGTGTACGTCCCTTTATTGCGGCATTAGTGAACAATATGTGGAGATCCACCACACCAGAAGAAGTCCTGGCTATCTTTCTTGTGGAACTACGAGTGATGGCCGAAGCTCAGCTGAAACGACCAATAAGAAATGTAGTCCTCACAGTTCCAGTTTCATTCAGTCGATTCCAGCTGACCCGGATAGAACGAGCTTGTGCTATGGCTGGCCTTCATGTTCTCCGGCTGATGCCTGAACCAACTGCTGTGGCTTTATTATATGGACAGCAGCAGCAGCAGAGTTCTCATGATAATATGGGCAGCGGAAGCGAGAAGATTGCTTTAATTTTCAATATGGGTGCTGGCTATTGTGATGTTGCTGTGACTGCTACAGCTGGGGGAGTATCACAGATCAAGGCTTTGGCAGGAAGTACCATCGGGGGAGAAGACTTGCTTCAGAATATGATGCATTATCTGTTACCAGAATCTCAAACCTTATTCAAGACCCACGGTATCAAAGAAATCAAATCTATGGCCTTGCTCCGAGTTGCAACTCAGGACGCCATTCATAGGCTCTCCTCTCAAACCAGTGCGCAGATTGATGTAGACTCGGGAGATGGTTTGAAGATAAACAAGGTTATAAAGCGGAACGAGTTTGAGGAAGTGAACAGAAAGGTGTTTGAGAAGTGTGAAAACCTCATCATCCAGTGTTTGCAAGATGCAAAGGTAGAGGCTCACGATGTAAACGATGTGATAGTCGTGGGCGGATGCTCTTATATTCCGAAGGTACAGAATCTTGTGGCTGGCATATTCAAAGGGAAGGAACTCAACAACGGTGTGAATCCTCTGGAAGCTGCCGTTCGTGGTGCAGCAGTTGAGGGAGCTGTGGCATCAGGTATCAATGATCCCTTTGGAAACTTGGACTTGCTAACTATCCAAGCCACACCTCTAGCTATAGGGATCAGAGCGGATGGAAACAACTTTGTCCCTGTGATACCAAGGAATACAACAATGCCAGCAAGGAAGGACTTGATTTTCACAACCTGTCATGATGATCAAACTGAGGCTTTGATCATTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGTTGGGATACTTCAAAATAGTAGGAATTCCTGAAGCACCCAAAGGAGTTCCGGAGATTAACGTGTGCATGGACATAGATGCTGCAAATGTACTGAGAGTGTTAGCAGGTGTCGTAATGCCAGGGTGTCGGCAGCCGGCAATTCCGGTCATGGAAGTAAGGATGCCTACTGTTGATGATGGCCATGGTTGGTGCGTTGAGGCCTTAAATAGGAAATGTGGTGATACACAAGACTTGGTTACTGTCCAGAAAAAAGCATAA 1890 0.4598 MVSACLDTSVSSSFISLSFLPCGLALSQPLHFSSFCCFYFPLGHLFPPSLLTHFPPPRMAEASYTVASDSETTGEDRSSAFPEVAIGIDIGTSQCSVAVWNGSEVELLKNTRNQKIMRSYVTFKDDTPSGGVSSQLSHEHDLLSGATIFNLKRLIGRVDTDPVVHSSKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRVMAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQSSHDNMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMHYLLPESQTLFKTHGIKEIKSMALLRVATQDAIHRLSSQTSAQIDVDSGDGLKINKVIKRNEFEEVNRKVFEKCENLIIQCLQDAKVEAHDVNDVIVVGGCSYIPKVQNLVAGIFKGKELNNGVNPLEAAVRGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNNFVPVIPRNTTMPARKDLIFTTCHDDQTEALIIVYEGEEKKAEENHLLGYFKIVGIPEAPKGVPEINVCMDIDAANVLRVLAGVVMPGCRQPAIPVMEVRMPTVDDGHGWCVEALNRKCGDTQDLVTVQKKA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0292 629 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 476 590 IPR029047 -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 419 435 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 479 498 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 84 97 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 451 471 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 224 244 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 560 576 - -
Lele21g0292 629 PRINTS 70kDa heat shock protein signature 112 124 - -
Lele21g0292 629 SUPERFAMILY Actin-like ATPase domain 282 467 IPR043129 -
Lele21g0292 629 Gene3D - 86 466 - -
Lele21g0292 629 CDD HSP70_NBD 86 466 - -
Lele21g0292 629 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 481 586 IPR029047 -
Lele21g0292 629 Gene3D Actin; Chain A, domain 4 319 400 - -
Lele21g0292 629 FunFam Heat shock 70 kDa protein 8 149 204 - -
Lele21g0292 629 Pfam Hsp70 protein 85 579 IPR013126 GO:0005524|GO:0140662
Lele21g0292 629 PANTHER HEAT SHOCK PROTEIN 70KDA 85 579 IPR013126 GO:0005524|GO:0140662
Lele21g0292 629 Gene3D - 270 448 - -
Lele21g0292 629 FunFam Heat shock 70 kDa protein 8 319 400 - -
Lele21g0292 629 Gene3D - 149 204 - -
Lele21g0292 629 SUPERFAMILY Actin-like ATPase domain 84 268 IPR043129 -
Lele21g0292 629 FunFam Heat shock 70 kDa protein 8 474 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0292 Lele-ChrLele21 1915781 1918961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0292 85 579 Calmodulin-binding Proteins AT3G12580 39.208 5.05e-105 330