Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0290 ATGGATGTTCATGTTCCCACTAAACTCCTTGCACTCTCTGTACCTTTCTTTCTGTTTCTTCTATGCTCTAATGCTCAAACGATCTCATCGAATTCTATCCAACTGGGTTCAAGCATCGTTGCTGGCTCTAATACATCTTGGAGATCTCCTTCTGCTGATTTTGCTTTCGGGTTCTATCCCATCCTCAATGGTCGCTACCTTGTCGGTATTTGGTTCGATAAGATTCCCAACAAAACTCTGGTCTGGTCCGCAAATCGTGATGACCCAGCTCAGATTGGATCCACCATCAATCTCACACTGAGTGGCCAGTTTGTACTGCATCATGCGAATGGTTCATTAGTTTCAATCTACAATCAAACAAATAATGTTTCTTCTGCTTCAATGCTGGATAATGGAAACTTCGTCTTGCAAAACTCACTCTCAAACACCATCTGGGAGAGCTTTGCTTCCCCCACAGATACCATTCTACCAGGCCAAAACTTGGTAATGCGTCAGATTATTTACTCCAATGCCAAAGGAACACTTGATTACTCGACCGGGAATTACAAGTTGGAGGTCCAATCCGACGGCAACATCGTCATCGCCGCTTTCAGGTATCCCGGCCGTGCTTATTGGTTCACTGGAACAATCAACAACAATAACATTAGCATTGTCTTCAACAACAATACATCTATGCTTTACGCCTTTAACGGCACTGGAATCATATACCAAATGACAGCACAAACAGAACTGCCTAACCCAATCGAAGATTACTATCAACGAGCAACCATCAACGATCATGGTAACTTTGAACACTTGATTATAAGTAAAGAAAATGGAAAAGAGTGGGCGCCTATATGGAGGGCTGTAACAGAGCCCTGCATAGTGGATGCTATTTGTGGGGTGAATGGCTTTTGCACTTCACCTGACAACAAGGTGGTCAACTGTGGCTGCTTGCCTGGGTATGCACCTTTTGATTCTTATGTTCCCTCCAAAGGCTGTTATCCCAAATTGGTGATGAATTTGTGCGCTCCAAATTCATCTGCCTCAGACTTCACTGTGCAAGAAATTTCAGATGCTGATATACCCAACTCGGAGTTTGCTGATATGCAATGGATACCGAACTCTGATTTGAATAGTTGCAGGAGAGAAGTGATGAATGATTGTTTTTGCATGGCTGGTGTTTTGATTGGCACTGATTGTTTTAAGAGAAGGACACCTCTTTTGAACGGAAGAATAAGCATCCCAACCACCGGTAATAGGGTGGCGCTAGTTAAAGTTCCTATGGTTGGCAAAGACGATGGAAATGACTCACCTTCTTGGATTGTTCTGCTTGTTTCAGTCTTGTCCTGTTCCCTGCTCGCTATTGTTTTTGCAGCTTCTGCTATTCATCATAACCCAAAGCTTCGCCGTTGGATACATAAAGAGCCACACCCCAAGGCAAAGCCAGTGGACATAAATCTAAAGATATTTTCATTTCAAGAGTTAAGAGATGCAACAAAGGGGTTCAAGAACAAGCTTGGTCGAGGAGCATTCGGTACTGTGTGCAGTGGGATTTTGACGTTGGAGGGCGGCGAACAGGTTGAGGTTGCGGTTAAACAACTGGGGAAAGTAGAGGAACAAGGTGACAGCTATGAGAAGGAGTTTTTGACGGAAGTTCAAGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGGTTAATAGGCTTCTGCAATGAACCAAACCGTCGCCTTTTAGTTTATGAGTTGATGAAAAATGGGTCACTCTCCAGTTTTCTTTTTGGGGAAGGGGATATACCCAGATGGGAAGATAGAGCCAAGATTGTGCTTCAAGTTGCAAAAGGCTTGCTATATCTACATGAAGAGTGTGACCCCCAGATTATCCATTGCGACATAAAACCACAGAATGTTCTTCTTGACTCCAATTATACGGCAAAAATTTCTGATTTTGGCATAGCAAAGCTGCTAAAAAAAGACAAAACTCGAACCAGCACCAACGTAAGAGGGACAATGGGATATATGGCACCAGAATGGCTCAAGAATGTACCAGTCACTGCACAGGTTGATGTGTATAGCTTTGGGGTGATGTTGCTGGAGACCATATTCTGCAGAAGACACATGGAGCTACATCCAAGTCAAGATGGAGGCATGATACTGATAGATTGGGTTCTAAATTCAGCAAAAGAAGGGAATTTGAGAGTGATGGTGGATCACGACGTTGAAGCTTTAAATGACTTCAATAGCTTTGAGAGGATGACTATGGTTGGATTATGGTGCTTGTCTCCTGACCCAACGGTTCGCCCATCCATGAAGAAGGTGACACAGATGTTGGAAGGGACCATGGAGGTTGGTCTTCCTCCTTTGATTGATGAACAAATGTCTCAAGTGTCTCTCATGGAGGCACAACTTCATTTGTAA 2397 0.4355 MDVHVPTKLLALSVPFFLFLLCSNAQTISSNSIQLGSSIVAGSNTSWRSPSADFAFGFYPILNGRYLVGIWFDKIPNKTLVWSANRDDPAQIGSTINLTLSGQFVLHHANGSLVSIYNQTNNVSSASMLDNGNFVLQNSLSNTIWESFASPTDTILPGQNLVMRQIIYSNAKGTLDYSTGNYKLEVQSDGNIVIAAFRYPGRAYWFTGTINNNNISIVFNNNTSMLYAFNGTGIIYQMTAQTELPNPIEDYYQRATINDHGNFEHLIISKENGKEWAPIWRAVTEPCIVDAICGVNGFCTSPDNKVVNCGCLPGYAPFDSYVPSKGCYPKLVMNLCAPNSSASDFTVQEISDADIPNSEFADMQWIPNSDLNSCRREVMNDCFCMAGVLIGTDCFKRRTPLLNGRISIPTTGNRVALVKVPMVGKDDGNDSPSWIVLLVSVLSCSLLAIVFAASAIHHNPKLRRWIHKEPHPKAKPVDINLKIFSFQELRDATKGFKNKLGRGAFGTVCSGILTLEGGEQVEVAVKQLGKVEEQGDSYEKEFLTEVQVIGLTHHRNLVRLIGFCNEPNRRLLVYELMKNGSLSSFLFGEGDIPRWEDRAKIVLQVAKGLLYLHEECDPQIIHCDIKPQNVLLDSNYTAKISDFGIAKLLKKDKTRTSTNVRGTMGYMAPEWLKNVPVTAQVDVYSFGVMLLETIFCRRHMELHPSQDGGMILIDWVLNSAKEGNLRVMVDHDVEALNDFNSFERMTMVGLWCLSPDPTVRPSMKKVTQMLEGTMEVGLPPLIDEQMSQVSLMEAQLHL 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0290 798 Gene3D - 26 148 IPR036426 -
Lele21g0290 798 SUPERFAMILY Protein kinase-like (PK-like) 477 771 IPR011009 -
Lele21g0290 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 210 IPR036426 -
Lele21g0290 798 PIRSF SRK 3 795 IPR024171 GO:0004674
Lele21g0290 798 CDD B_lectin 37 151 IPR001480 -
Lele21g0290 798 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Lele21g0290 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Lele21g0290 798 Pfam D-mannose binding lectin 79 165 IPR001480 -
Lele21g0290 798 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Lele21g0290 798 SMART blect_4 38 151 IPR001480 -
Lele21g0290 798 ProSiteProfiles Protein kinase domain profile. 494 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0290 798 CDD STKc_IRAK 500 772 - -
Lele21g0290 798 ProSitePatterns Protein kinases ATP-binding region signature. 500 526 IPR017441 GO:0005524
Lele21g0290 798 Pfam Protein kinase domain 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0290 798 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 777 - -
Lele21g0290 798 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Lele21g0290 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 780 - -
Lele21g0290 798 FunFam S-receptor-like serine/threonine-protein kinase 464 576 - -
Lele21g0290 798 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 27 149 - -
Lele21g0290 798 Gene3D Phosphorylase Kinase; domain 1 468 576 - -
Lele21g0290 798 SMART serkin_6 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0290 798 Gene3D - 149 243 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0290 Lele-ChrLele21 1904536 1906932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0290 480 772 Receptor kinase-like Gene Family AT1G60800 41.806 2.23e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele21g0290 Pkinase 1.5e-50 CL0016