Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0282 ATGTGTACAATTCAGAAAAAGCTGGACGCCACAATTTCAATTATTCAAGGCGCAGTCATGCCCAGGCTTCCAAGTTTTCCCGCCGGTTCAGTTTATGAGCCAACAAACCATAACGCGCAGAAGGTTGATTCATTCTGTTACTGTCCTGCAATTCCCGAAATACCCCTCCGACCTGCCATCTATCAAATCCCAAATTCCATTTCGGATCAGCCTTTGTCTCTCTCTGAATCCATTTCCAGCACACCCTGTCTCTGCGAGGGACCCCCTCTCCTTTCTATGGAGCTTCATAAGCGCCAAGATCACAGTCCCCCTGAGAGGAAAGGCCAGAAGCGGAAGCTGGAGGAAGATTTCGAAGACGAGAGAGAGATCTCGGCGCCTCCTACCGGCGACGCCCGGGACGCCCTTCTCGCTGAGGTCACAGCGCAGGTTGAAATTCTCGACTCCAATTTTTCAGGGCGCGATCCCGATCGAGCTGCGGCTAAGCGTGCCACTCACGTTCTCGCCGAGCTTGCTAAGAATGAGGAAGTAGTGAACGTGATTGTTGAAGGAGGCGCTATTCCGTCTCTGGTTAAGCATCTTCAAGCGCCGCCTTCAAGTGAAGGTGATCGTGATCAAAAGCCATTCGAGCACGAGGTTGAGAAAGGGAGTGCCTTTGCTTTAGGACTTCTTGCCGTTAAGCCAGAACATCAACAACTAATTGTTGACAATGGTGCCTTAAAACATCTTGTTGACCTGTTAAAGAGGCATAAGAATTGCTCTACTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGATGCAATCACTAATCTTGCTCATGAGAACAGCAACATTAAAACCCGTGTCAGGATGGAAGGTGGAATTCCACCACTTGTTGAATTGCTTGAATTTACTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACTCTGGCATTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTCTAATTTTAATGCTCCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGGGTAATAGGAAATCTGGTACACTCTTCGCCTAATATAAAGAAAGAAGTTCTTCTTGCCGGGGCTTTACAACCTGTTATTGGATTACTTAGCTCCTGCTGCTCTGAAAGCCAAAGGGAAGCTGCCTTGTTACTTGGACAGTTTGCAGCAACTGATTCAGATTGTAAGGTTCACATTGTTCAGAGAGGTGCTGTCCGACCTCTGATAGAGATGCTTCAGTCCCCTGATGTTCAACTCAGAGAAATGTCTGCCTTTGCTTTGGGGAGACTCGCACAGGACGCCCATAACCAAGCTGGTATAGCACACATTGGAGGTTTAGCACCATTACTCAAGCTCCTTGACTCGAAAAATGGGTCTTTGCAGCATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGTGTTCAGAGGCTTCAGGATGGAGAGTTTATTGTTCAAGCAACAAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAGGAGAAGATTCATGGCCGTGTCCTGAACCATTTGTTATACCTTATGCGAGTTTCAGAGAAGACTGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGCAGATGATCAGAGAACCGTATTCATTGATAACAATGGTTTAGAATTTCTTATTGGGCTTCTTGGCTCTACTAGTCCTAAGCAGCAACTTGATGGCGCTGTTGCTTTATGCAAATTGGCCAACAAAGCCACTACTCTATCACCAATAGATGCGGCTCCTCCTTCCCCAACGCCCCAGGTTTATTTGGGAGAGCAGTATGTGAATAATGCTACATTGTCTGACGTGACATTTTTGGTTGAAGGGAAACGATTTTTTGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGCGCTATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGAGACATAGAGATCCCAAATATTAGATGGGAAGTTTTTGAGTTGATGATGAGATTCATATATACTGGATCAGTTGATGTTACTCTTGATATTGCCCAAGATCTCCTCAGAGCAGCTGATCAATATCTCTTAGAAGGACTCAAGAGACTTTGTGAGTACACGATAGCACAGGATATATCACTGGAGAATGTTTCTAGTATGTATGAACTCTCAGAAGCCTTCAATGCAATTTCATTGAGGCACACATGCATCCTTTTTATCTTGGAGCACTTTGATAAATTGAGGGCCAAACCGGGGCACTCTTGTCTGGTTCAGCGTATAATACCAGAGATCCGCAACTACTTTGCCAAAGCTCTCACAAAAGCTAACTCCCGTGACATCCGGCTGTAG 2394 0.4511 MCTIQKKLDATISIIQGAVMPRLPSFPAGSVYEPTNHNAQKVDSFCYCPAIPEIPLRPAIYQIPNSISDQPLSLSESISSTPCLCEGPPLLSMELHKRQDHSPPERKGQKRKLEEDFEDEREISAPPTGDARDALLAEVTAQVEILDSNFSGRDPDRAAAKRATHVLAELAKNEEVVNVIVEGGAIPSLVKHLQAPPSSEGDRDQKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHKNCSTSRAVNSVIRRAADAITNLAHENSNIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDAHNQAGIAHIGGLAPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKTVQRRVALALAHLCSADDQRTVFIDNNGLEFLIGLLGSTSPKQQLDGAVALCKLANKATTLSPIDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFFAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEHFDKLRAKPGHSCLVQRIIPEIRNYFAKALTKANSRDIRL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0282 797 SUPERFAMILY ARM repeat 153 500 IPR016024 -
Lele21g0282 797 SMART arm_5 173 225 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 558 598 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 276 316 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 443 483 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 360 400 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 318 358 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 402 442 IPR000225 GO:0005515
Lele21g0282 797 SMART arm_5 226 274 IPR000225 GO:0005515
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 371 IPR000225 GO:0005515
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 454 496 IPR000225 GO:0005515
Lele21g0282 797 ProSiteProfiles BTB domain profile. 630 697 IPR000210 GO:0005515
Lele21g0282 797 SUPERFAMILY ARM repeat 528 701 IPR016024 -
Lele21g0282 797 Gene3D Potassium Channel Kv1.1; Chain A 611 759 IPR011333 -
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 287 322 IPR000225 GO:0005515
Lele21g0282 797 MobiDBLite consensus disorder prediction 96 127 - -
Lele21g0282 797 Pfam Armadillo/beta-catenin-like repeat 318 357 IPR000225 GO:0005515
Lele21g0282 797 Pfam Armadillo/beta-catenin-like repeat 227 257 IPR000225 GO:0005515
Lele21g0282 797 Pfam Armadillo/beta-catenin-like repeat 402 441 IPR000225 GO:0005515
Lele21g0282 797 Pfam Armadillo/beta-catenin-like repeat 283 315 IPR000225 GO:0005515
Lele21g0282 797 Coils Coil 795 797 - -
Lele21g0282 797 MobiDBLite consensus disorder prediction 96 128 - -
Lele21g0282 797 CDD BTB_POZ_ARIA_plant 617 732 - -
Lele21g0282 797 Pfam BTB/POZ domain 623 725 IPR000210 GO:0005515
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 287 IPR000225 GO:0005515
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 413 455 IPR000225 GO:0005515
Lele21g0282 797 SUPERFAMILY POZ domain 622 724 IPR011333 -
Lele21g0282 797 FunFam Armadillo/beta-catenin repeat family protein 621 765 - -
Lele21g0282 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 238 IPR000225 GO:0005515
Lele21g0282 797 SMART BTB_4 630 727 IPR000210 GO:0005515
Lele21g0282 797 Gene3D - 506 606 IPR011989 -
Lele21g0282 797 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 93 791 IPR044282 -
Lele21g0282 797 Gene3D - 137 505 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0282 Lele-ChrLele21 1865458 1872732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0282 289 493 U-box Gene Family AT1G23030 28.155 1.41e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele21g0282 BTB 1.7e-25 CL0033