Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0253 ATGAAGAAAAGCATGATCCAGAAACAACCATCTCCTGAGAATTTGAACGATGCATCAAGCAGCAGCACTGGCCTCTCCTCAGATGACAAGGACATTGACTGCACCAATGCAATCTCTAATCAGAAATATATTTTGGTGAAAAACTCTGCTTTTCATAACTCGCCCATCAGACTTGACCTGAATTATGCTCGCATGGCCATGGCAGAGATGATGGGTACTTTCATTCTGATGTTCTGTGTGTGTGGAATCATTGCAAGCACGCAGTTGCAGAATGGACAAGTGGGCCTTCTGGAGTATGCAGCTACGGCAGGATTAACAGTGGTTGTAGTGATCTTCTCAATAGGGCCAATCTCTTGTGCTCATGTTAACCCAGCCGCCACAATAGCTTTTGCAGCATTTGGTCAATTTCCATGGCTGAAGGTTCCAGTTTACATAGTAGCACAGACAGTGGGTTCTGTGTTGGCAACATATATTGGTGGCCTTGTCTATGGGATTAAATCAGATGGCATGATGACAAGGCCAATCCAAGGGACTGTCTCAGCTTTCTGGGTGGAGCTTATTGCGACTTTCATCATAATGTTCCTTGCTGCTGCCTTGACAAGTGAATTTCAATCAGTGGGTCATTTATCAGGTTTTGTTGTTGGAATAGCTATTGGACTTGCAGTGTTAATCACCGGGCCTGTTTCAGGGGGGTCAATGAATCCTGCAAGATCATTAGGCCCAGCAATTGTGGCATGGAAATTCAAGGACATATGGATATACATCACGGCCCCCATAAGTGGAGCTGTGGCAGGTGTTCTGTTATTTCGTTTTCTGCGTCTCAAACACCAACCAAGCTCTACTTTCTCTCCTCTCCCACCACAACTCACGACAGCCGTTCCATAA 885 0.4542 MKKSMIQKQPSPENLNDASSSSTGLSSDDKDIDCTNAISNQKYILVKNSAFHNSPIRLDLNYARMAMAEMMGTFILMFCVCGIIASTQLQNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFAAFGQFPWLKVPVYIVAQTVGSVLATYIGGLVYGIKSDGMMTRPIQGTVSAFWVELIATFIIMFLAAALTSEFQSVGHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAIVAWKFKDIWIYITAPISGAVAGVLLFRFLRLKHQPSSTFSPLPPQLTTAVP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0253 294 Gene3D Glycerol uptake facilitator protein. 20 281 IPR023271 -
Lele21g0253 294 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele21g0253 294 SUPERFAMILY Aquaporin-like 59 279 IPR023271 -
Lele21g0253 294 PANTHER AQUAPORIN NIP2-1 41 277 IPR034294 -
Lele21g0253 294 MobiDBLite consensus disorder prediction 1 28 - -
Lele21g0253 294 Pfam Major intrinsic protein 62 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0253 Lele-ChrLele21 1674216 1675668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0253 67 278 Major Intrinsic Protein MIP AT5G37820 41.315 4.28e-53 174