Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0247 ATGGATGAAGTTAATGAAAACTTGAAGACACAAATAGCAGCACTTTTGCGGGTTATCTCTGCCGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGACTTTTCTTGGGTTCGGTTGGCGCTGCAGCCAACAAGGATGCACTTAAAAACTTCAATGTCACTCATGTTTTAACTGTGGCTAATACTCTGACACCCGCGCATCCTAATGATTTTGTATATAAAACTATAAACGTTGTTGACAGAGAGGACGTAGACATAAAACAATACTTCAACGAGTGCTTTGATTTTATTGATGAAGGCAAAAGACTTGGTGGAGGAACTCTAGTTCATTGCTTTGCTGGAAGATCCAGGAGTGTGACTATAGTGATTGCATATCTGATGAAGACTCATCGAATGAGTTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGGCCTGCAGCATCTCCCAACCTTGGTTTCATTCGACAGCTGGAGGACTTCGAAAAATCTCTTCAAGAGTCCCAGTGCAGAACACACAGGCGTTTGCCTTCTCAACTAGTAGTTGACATGTTTGCTGCCACGGATTCCGTAAGTGGAGCAGATTTGGCTTTGGAATTGGAAAATTTGATCGGGATTAGCATGTGA 639 0.4257 MDEVNENLKTQIAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKDALKNFNVTHVLTVANTLTPAHPNDFVYKTINVVDREDVDIKQYFNECFDFIDEGKRLGGGTLVHCFAGRSRSVTIVIAYLMKTHRMSLSQALEHVKSRRPAASPNLGFIRQLEDFEKSLQESQCRTHRRLPSQLVVDMFAATDSVSGADLALELENLIGISM 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0247 212 CDD DSP 31 164 - -
Lele21g0247 212 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 91 150 IPR000387 GO:0016311|GO:0016791
Lele21g0247 212 FunFam Dual specificity phosphatase 12 32 185 - -
Lele21g0247 212 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 171 IPR020422 GO:0006470|GO:0008138
Lele21g0247 212 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 170 IPR029021 -
Lele21g0247 212 Pfam Dual specificity phosphatase, catalytic domain 38 167 IPR000340 GO:0008138|GO:0016311
Lele21g0247 212 SMART dsp_5 30 168 IPR020422 GO:0006470|GO:0008138
Lele21g0247 212 Gene3D Protein tyrosine phosphatase superfamily 32 195 IPR029021 -
Lele21g0247 212 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 28 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0247 Lele-ChrLele21 1651371 1654003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0247 33 170 Protein tyrosine phosphatase (PTP) family AT3G06110 61.594 3.53e-60 184