Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0245 ATGTCCAAAGTTGAGCCAGTCAGAGTCACTTTTCAGAAAGGAGTTGGACAAAAGTTGTCAGCCCTCAGGAACTGGTGCATTGACTTAGGCTTCTTTGAGTTGGATGATCTCTCAAAGCCCTCACAAGGAGATGTCTTTCCCCTTGTAGTATGTGCTGAAACATATTCGGGAACTCCTCCAGCAGCTGAAAACTTCGGTGATTCGATGGCTGATGTATCACCTTACACGCAGATAACTCGAGCTGTTATTGAGAAAAGCAATGGCAGTAGTTCTTTCCAGTGTATGTGCAGTGAGTGCGCCAAAGCGTTGAGGCTTCAATCAAATAAATGCCCCATATGCTGTCAATCCATTGAGGAACTTGTAGAGATCAAGATAAATAATGTTGGCATAGTACAAGCTTATTTCGAGGTGGAGCCAAAGCTGGGGGGCACACGACATGTCACGCCGGTAACCGAGTTTGTCCCCAGAAAGCAACGAAAAAGGGCTCTTAGAAAAGGGAAGAAGCAGAGAGCTTGTGTGGGTGCCGTTCCAGCTGTACTCATCTTATCTATTACCTCCCTCTTTCCTTCAATTTGGGGGGCTTCCAACATGAGTAAAGAAGAGTTCTTGAAGATACAGAAATCTGTTCTTAAAGTGAACATACACTGCGATGGGTGTAAGCATAAGGTGAAGAAAATCTTGCAGAAAATCGACGGGGTGTTTACGACGGAGATAGATGCGGAACAGGGGAAGGTGACGGTGTCTGGGAATGTGGACCCCAACGTTCTCATCAAGAAGCTTGCGAAATCGGGGAAGCATGCAGAGCTCTGGGGTGCTCCCAAATCAAACAACAATAACAACCAGAACCAGTATCACCTCGCTAACCAGTTCAAGAACATGCAAATCGACAATGGCAAAGGCGGTGGAAATAACAAGGGCCAGAAAGGCGGAAACAACCAGCCCAAGGGCGGCGGCGGTGGAGGCCAGAATGGAGGACTGAATCCTCAACAGCTTCAGAGTCTTCAAGATCTGAAACTTCCTCAATTCAAACTGCCTCCAGGCCTTAACCCAAACCAGAACCAAAAATCTCTCAAGTTAGACTTGCCGGAGGATGACGACGATTACAGCGACGACGAGCTGGACGATGAGTTTCTTGACGATGGTTTGGATGATGACGAGTTCGACGACGATGAACTGCACGAACCCCCTCCTCCCCTGAACAAGGTGAAACCTGCTATGGGGAACGGCACTCCCTTGATGATCAATGGCATGAATATGATGAATCCTCCGAAGGGTGGGAATGCCGGACCATGGAATGGGAAAAAAGGAGGAGTCGGAGGAGGAGCGGTTCCTATTCAAGTTCACGGTATGAGCGGGGGAAATGACGGCAAAAATGGGAAAGGGGTAAAGAAAGGCGGAGGAGGAAACAATCAGAACCAAGGTGGAGGGAATAAGAACAATGGTGGGAGTGGCGGTGGAGGAAACAATAACAAGGGCGGTGACGGTGGGGGCAAGAATGGGATGATGGGAGCCATTCAGGCTATGAACGAAGGTTTCCAGCACATGGGGGGTGGTGGTGGTGGGGTTGGTAACAAGAGCATCCCCATGGGTGGCATGGGCAACATACCGATGGGTCAAATGGGCGGCGTCCCCGCCGTCCAAGGCCTCCCCGCAGCCTCCATGAACGGCAGCGCCGGCGGGTACTTCCCAGGCGGGGGTCCGGACGTGATGCCCGAGAACCCTTACAACCACCAGCAGCAGCAGCAGCAACAGTATATGGCGGCACTAATGAACCAGCAGAGATCGATGGGGAACGAGAGATTCCAACCAATGATGTATGCGCGGCCACCGCCGGCGGTGAACTACATGTACCCGCCGCCGCCATACCCTTATCCGCCGCCACCGGATCCATATGCTAGCTATTCCAGCGACGAGAACCCTTCGAGTTGCAGCGTGATGTAA 1941 0.5116 MSKVEPVRVTFQKGVGQKLSALRNWCIDLGFFELDDLSKPSQGDVFPLVVCAETYSGTPPAAENFGDSMADVSPYTQITRAVIEKSNGSSSFQCMCSECAKALRLQSNKCPICCQSIEELVEIKINNVGIVQAYFEVEPKLGGTRHVTPVTEFVPRKQRKRALRKGKKQRACVGAVPAVLILSITSLFPSIWGASNMSKEEFLKIQKSVLKVNIHCDGCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAELWGAPKSNNNNNQNQYHLANQFKNMQIDNGKGGGNNKGQKGGNNQPKGGGGGGQNGGLNPQQLQSLQDLKLPQFKLPPGLNPNQNQKSLKLDLPEDDDDYSDDELDDEFLDDGLDDDEFDDDELHEPPPPLNKVKPAMGNGTPLMINGMNMMNPPKGGNAGPWNGKKGGVGGGAVPIQVHGMSGGNDGKNGKGVKKGGGGNNQNQGGGNKNNGGSGGGGNNNKGGDGGGKNGMMGAIQAMNEGFQHMGGGGGGVGNKSIPMGGMGNIPMGQMGGVPAVQGLPAASMNGSAGGYFPGGGPDVMPENPYNHQQQQQQQYMAALMNQQRSMGNERFQPMMYARPPPAVNYMYPPPPYPYPPPPDPYASYSSDENPSSCSVM 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0245 646 MobiDBLite consensus disorder prediction 341 406 - -
Lele21g0245 646 Gene3D - 205 275 - -
Lele21g0245 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 124 IPR013083 -
Lele21g0245 646 FunFam Copper transport protein ATOX1 204 273 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 363 392 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 293 311 - -
Lele21g0245 646 CDD HMA 209 268 IPR006121 GO:0046872
Lele21g0245 646 ProSiteProfiles Heavy-metal-associated domain profile. 213 269 IPR006121 GO:0046872
Lele21g0245 646 SUPERFAMILY HMA, heavy metal-associated domain 206 271 IPR036163 GO:0046872
Lele21g0245 646 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 201 646 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 465 487 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 423 502 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 626 646 - -
Lele21g0245 646 MobiDBLite consensus disorder prediction 293 329 - -
Lele21g0245 646 Pfam Heavy-metal-associated domain 210 266 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0245 Lele-ChrLele21 1632957 1640080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0245 6 127 C3H Transcription Factor Family AT3G06140 36.111 1.01e-19 89.7