Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0234 ATGACGTGGTGGTCTGGCTGCATACAGAGAAATTCTTGTGTGCACCGTGCAGACAAGAATTTCTGCATCGATGACATATCCAGGTATGAAGCACCACTTCTAAGGAAATTTGCATACAAAGTGGCAGCAGAGGGATTCTTAGTGGTTGTTCCTGATCTTCTGTATGGTGACTACTTTGATCCGCACAACCCTCAATGTGATATAGACACATGGAGAAAGGCTCATGGACCGGTTAGTTTGATGCTTAGAGATGTGAATCCATTGTTCATCTGCTTTAAGGATGAACTCACTATGGTTATTGGTGACATTTTTGGTAGTGTTTCTACTTTCTTTTCTCCAGAGGTCAAGGGTCCTACTTCTATATTGGAAGCGGAAAATGACAATATTTTCCCTCCAGAAAAGTTGAGGCAACTTGAAGAGATTTTGTCTGCAAAAGCACAGGATGCTAGAAATGAATTCTTGAAGCTTTATTTATCAAGGGTCAAAACAATTTACGTGATGATGGCCAAGAAAATTTCTGACTCTGAAGTACGAAATAGGCTTGTTGCTTTGGCTCCAAGAAGATTGCACAAACATTTTGCAAAACATAAAGGGGAGAATGATAAACTAATAGCAGAAGTGGTTGGAAGAGGGAGAGTCAGAAAACGATACAAAGCATTGCAGAGATTACAGGAAGACAAGATTGCAGCTAAAGGGTACCATGCAGTTGTTCGTGACTTCTTGCATGAAGATCCCTTTGCCTACGAAAATGCCAGCAGACTTCTGCCAGTTTGGCTAAAAGATCATGAGCCAGATAGTTGTTATGTGAAGGTGGTTACCAAGGTGTCTCATGGAAGGTGTTTTGAATTTGTGTTGCCATGGGAGGCGTTGGTTGCATCATTCAGAATTCAGATGTTGATTTGTGTTTTGAATGATGCTCTCAAGAGCATGTACAATGCTGAGAAAAGGGGAAAGCGTCAGGTCATGATTAGGCCATCCTCAAAAGTCATTATCAAGTTCCTCTTGGTCATGCAGAAGCATGGATACATTGGGGAGTTTGAATATGTGGATGACCATAGGGCTGGCAAAATTGTGGTTGAGCTGAATGGAAGATTGAACAAATGTGGGGTTATTAGTCCTCGTTTTGATGTAGGTGTCAAAGATATAGAACCCTGGACTGCAAGGCTACTTCCCTCAAGACAGTTTGGCTACATCGTCTTGACAACCTCAGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGGAAAGTGTTGGGTCAGGAAGTTGATCAAGCTGTATTGCGCTGTCTTGTTGAATTTGTACCCTCCAATGTCCAATCAATGTTCAATATCATTGGACTTGAGCGCTGCGATGCGCGGGAGAGATTTCTTACACCCCATCAATTCATCTGTTGTATATTTACCAAACACTTTGACCCTATCTCTTTTAATAAAGCACAACACCCCAGCCATCCTGTTGGAGTAACATGGTTTCTCTGGGATTCTCTTTCTGAGATCCGGAAGCTTTTTTATTTCATTTCTTTTTTTCGTAGCTTACTCGGAAGAATTTTCCATTCCATTCCAATCCGTCTATTCCATGCTTCTTCATTCATCCCATCTGCTGCACGACCCACTAAGGAATCTTATCCTGCTTTAAAACCACAAGCCTTCCCCAGTGGTCTGTGTTGTTTTTCTAGCGCGTTAGAGATTATCGCCATAGCAGATCCTTCAAGATTGTTTTTTCCCGCTATTCTTTAG 1749 0.4185 MTWWSGCIQRNSCVHRADKNFCIDDISRYEAPLLRKFAYKVAAEGFLVVVPDLLYGDYFDPHNPQCDIDTWRKAHGPVSLMLRDVNPLFICFKDELTMVIGDIFGSVSTFFSPEVKGPTSILEAENDNIFPPEKLRQLEEILSAKAQDARNEFLKLYLSRVKTIYVMMAKKISDSEVRNRLVALAPRRLHKHFAKHKGENDKLIAEVVGRGRVRKRYKALQRLQEDKIAAKGYHAVVRDFLHEDPFAYENASRLLPVWLKDHEPDSCYVKVVTKVSHGRCFEFVLPWEALVASFRIQMLICVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGQEVDQAVLRCLVEFVPSNVQSMFNIIGLERCDARERFLTPHQFICCIFTKHFDPISFNKAQHPSHPVGVTWFLWDSLSEIRKLFYFISFFRSLLGRIFHSIPIRLFHASSFIPSAARPTKESYPALKPQAFPSGLCCFSSALEIIAIADPSRLFFPAIL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0234 582 Pfam Ribosomal protein S8 303 423 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele21g0234 582 FunFam 40S ribosomal protein S15a 366 425 - -
Lele21g0234 582 Gene3D - 366 424 - -
Lele21g0234 582 FunFam 40S ribosomal protein S15a 297 365 - -
Lele21g0234 582 Gene3D - 298 365 - -
Lele21g0234 582 ProSitePatterns Ribosomal protein S8 signature. 396 413 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele21g0234 582 PANTHER 40S RIBOSOMAL PROTEIN S15A 301 423 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele21g0234 582 SUPERFAMILY Ribosomal protein S8 299 423 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0234 Lele-ChrLele21 1519343 1529595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0234 300 423 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 95.968 6.52e-81 248