Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0225 ATGGAGCGCCGCACAATCTTGCAAGACCCAGTAGGGGCAATGCCGCCGGTAATGACGGCAAGATTGGAGCGTCGGTTTCTCCTTATCCCGCCTTCCGGCCATTCTTCAAAACGGGAAGGTAATTCCTTATTTGCAAAACCTTATTTGCAAAACCCTAGCTTTGATCAACTCCATTTCCTGGGTTTTCTCATCGAGATGTTGAGGCATGATAAAAAGGAAGAAAAATCAGTATATCGCTTTCTAGGGGTTTCAAATACTCCATATCCTACTGATGTTGCTGTAACTGATCCAGAAAACCCTGTAGGCACAAAACTGGCCATGAATAATATCAGTGGAGAGCAGGAAAGAGAACTTGTCCATGAGCCATACATTGGATTAGAGTTCGAATCAGCAGATGATGCTCTTAAGTTTTACACGTTATATGCAAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATAGATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCAAGAACCGGTTGTCCGGCATTTATAAGAGTACAAAAGTGTGATTCAGGGAAGTGGGTTGTTGATCATTTCATTAAGGTCCACAATCATGAACTTGAACCTGAAGATGAGGGTGGAATTTGCCTTCCTAATTTGCAGCAGAAAGATGCTACAGGTATAAAATCTGTTAGTGAGGTGTCTCACAGACCAAGGAAAAAATTGCTTCAAGTCAAGGACGAGCATTGTTCCTTTGGCATGTTTAATTTTAAGCGGATGCTGAAAGGAGATGAAGGGCCATCAAGAGCTGAGCCATATGCATATGCAGCATGTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGGTCTAAAAGTCAAGGATTAATTACATCCCGACGATTTGTGTGCTCCAAAGAGGGGTTCCAACACCCTTCAAGAGTTGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAATTGGGTGGTGGATCGTCTTCAAAAGGAGCATAATCATAATATTGATCCTGAACAGGAGTGTAGGCCAAAAAGTCTTCCTGCTTTAAATATTTTGACAGATGAGATTGATGCAGGATTGGTAAATGGTGACTTATTTAGAATAGATAACTACCCTCTTCCTAGAGGAGGCCGACAAAATCATATCAAAACTGACTGGTACAAATCATGGAGCAGCTCTCAGGAACTGAGGAATTTGATGCTGTGGAGTCTAAGAGAAACTGGATGCAAATATATAGATGCTGGAGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAGGGGGGAAGGAAGCTATGTTGGCATAGGTGA 1359 0.4224 MERRTILQDPVGAMPPVMTARLERRFLLIPPSGHSSKREGNSLFAKPYLQNPSFDQLHFLGFLIEMLRHDKKEEKSVYRFLGVSNTPYPTDVAVTDPENPVGTKLAMNNISGEQERELVHEPYIGLEFESADDALKFYTLYAKQAGFKVRIGQLYRSRTDRSVSSRRFVCSKEGYQLSSRTGCPAFIRVQKCDSGKWVVDHFIKVHNHELEPEDEGGICLPNLQQKDATGIKSVSEVSHRPRKKLLQVKDEHCSFGMFNFKRMLKGDEGPSRAEPYAYAACVGFRVRIGQLFRSKSQGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGNWVVDRLQKEHNHNIDPEQECRPKSLPALNILTDEIDAGLVNGDLFRIDNYPLPRGGRQNHIKTDWYKSWSSSQELRNLMLWSLRETGCKYIDAGATSLDKYKLAYEILQEGGRKLCWHR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0225 452 Pfam FAR1 DNA-binding domain 277 348 IPR004330 -
Lele21g0225 452 Pfam FAR1 DNA-binding domain 136 211 IPR004330 -
Lele21g0225 452 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 276 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0225 Lele-ChrLele21 1480199 1483816 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele21g0225 FAR1 4.8e-18 CL0274