Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0216 ATGGGTTGTGTCCACGGCAAGTGTTGTAGCCCCTACCCGCCGCCGTCGGAGGGTGGTTCTGTGGACCGCCGAGAACTCGGTCCTTCCAGTTTCCAGCCGAAACACATACTTACTCAGAAATCATTGGAGTCTATTCCCATTCCGTCCCACAACTTCACTTTGGAATACTCCGTTCTTACGCAGAGAGGATATTACCCTGATACGCCAACCAAAGAAAACCAAGATAGTTACTGCATTAGGACACAAATTCAAGGCAACCAAAGTGTACATTTCTTTGGTGTCTATGATGGGCACGGCCAATACGGTAGTCAGTGTTCTAACTTTGTTAGAGACAGGTTGGTAGAGACATTATCAAATGACTACACTTTGTTGAATGACCCTGTTAAAGCATATGCTTCAGCATTTGTATCAACTAATCAAGAATTACACAATTCTGAGATTGATGATTCTATGAGCGGCACTACTGCAATCACAGTGCTTGTTATTGGAGACGTTCTATATGTTGCTAATGTTGGTGATTCGCGAGCAGTTTTAGCTGTTAAGGATGGAAACCGCATTGTTGCCGAGGACTTGTCCTCTGATCAGACACCGTTCAGAAGAGATGAATGTGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGCTGAGTGTTGATCAGGTGGAGGGGCTTAAGGATCCAAATATTCAGACTTGGGGTGATGAAGAGAGCCAGGGTGGTGATCCTCCCAGGTTATGGCTTCCAAACGCGATGTATCCCGGAACTGCATTTACAAGGAGTGTAGGGGATAGTTTAGCAGAGACCATTGGTGTCATTGCTATTCCAGAGGTGTCAATGGTTCGGCTTACGCCTAATCATCCATTCTTTATCGTTGCAAGTGATGGCGTGTTCGAGTTCCTATCTAGCCAAACTGTTGTTGATATGGCAGCAAGCTATTCGGATCCCCGTGATGCATGTGCCGCAATTGCTGGAGAATCATATAAACTGTGGTTGGATCATGAGAGCCGAACAGATGATATAACAATTGTCATTGTTCATATCAAAAGCCTGTCTAATTCAGTTGCACGTGTGGCATCAAGTGATATCAATGTTAGTGGTTTAGCAAGGGCCAAGTCCAGGAGAGGAACTTTGGAGATATCTCCAACCACATCTGATGGTCATCGTTCTGTGGGGAATAACTTGTCTCATTTGCAGTCCTGTCAGCATTTGGTCTCCATGAGGAATGCAGCAATAGTGGTCCCGTCTCCGGCATGCCCAAGGTCGGTTGAATTGTGA 1269 0.4586 MGCVHGKCCSPYPPPSEGGSVDRRELGPSSFQPKHILTQKSLESIPIPSHNFTLEYSVLTQRGYYPDTPTKENQDSYCIRTQIQGNQSVHFFGVYDGHGQYGSQCSNFVRDRLVETLSNDYTLLNDPVKAYASAFVSTNQELHNSEIDDSMSGTTAITVLVIGDVLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDECERVKLCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWLPNAMYPGTAFTRSVGDSLAETIGVIAIPEVSMVRLTPNHPFFIVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLDHESRTDDITIVIVHIKSLSNSVARVASSDINVSGLARAKSRRGTLEISPTTSDGHRSVGNNLSHLQSCQHLVSMRNAAIVVPSPACPRSVEL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0216 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Lele21g0216 422 SUPERFAMILY PP2C-like 45 347 IPR036457 -
Lele21g0216 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Lele21g0216 422 CDD PP2Cc 71 345 IPR001932 -
Lele21g0216 422 Pfam Protein phosphatase 2C 84 320 IPR001932 -
Lele21g0216 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Lele21g0216 422 PANTHER PROTEIN PHOSPHATASE 70 344 - -
Lele21g0216 422 Gene3D - 46 347 IPR036457 -
Lele21g0216 422 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0216 Lele-ChrLele21 1425481 1427805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0216 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.286 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0216 21 1425481 1427805 Lele15g1517 15 8984420 8988913 CCT
Lele21g0216 21 1425481 1427805 Lele21g0216 21 1425481 1427805 ECH
Lele21g0216 21 1425481 1427805 Lele23g1838 23 21736430 21739389 hybridization
Lele21g0216 21 1425481 1427805 Lele24g0212 24 1367853 1370002 hybridization