Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0206 ATGTTAGGGGATGAACCAGAATCGGGTGGTTCGAATTTCGATCTTCCCGAGGAGGTGCTGCGAGCTCTGCCATCGGATCCTTTCGAGCAGCTTGACGTGGCCCGCAAGATTACTTCCATTGCCCTCTCGACGCGTGTCAACGCCCTCGAATCAGAAGCCTCCGACCTTAGCGCCAAGCTCGCCGAGAAAGATTCCCTCATCGCGGAGCTTCAGTCCCAGCTCGAATCCCTCGATGCCTCCCTCTCCGAAACCGCCGATAAGCTCGTCCGAGCCGACCAAGATAAGGAGAGCTTGCTTAGAGAGAACGCTTTGATTTCTAATACTGTGAGGAAGCTCAATCGAGATTTGGAAGTTTTCAGAAGGACGCTTATGCAATCGCTTCAAGAGGATGAAGAAAATTCGGGAGGAGCATCGGCACAGATTGGAGATGATGATGCCTCGTTCCCAGCTTCTAGAACTTCTTCAATGAGAACCCATATCGCTGATACAGGATACTTATTGTCTGATGATCGTGAGGCTGATGCCACTAGACCTCGGGTATCGCCCTGTCTCCTCTTAGCATCGCAAGCTAGCACCCCTCGGATTACTCCTCCCGGTTCTCCTCCTAGTTTATCTGCATCAGTATCACCAACAAGAACATCTAAACCCGTGTCTCCAAGGCGACATTCAATTTCATTTTCAACTTCATTGTCAAGCTCTGACACAGCATCGCAAACTGGACGAACGAAGGTGGATGGGAAGGAGTTCTTTCGCCAAGTCAGGAGCCGTCTGTCTTATGAGCAGTTTGGTGCATTCTTATCAAATGTTAAGGAACTGAATTCCCATAAGCAAACCAAAGAGGAAACCCTACGGAAAGCTGATGAGATATTTGGGCCTGAAAACAAGGACCTCCATGCGATATTTGAGGGATTGATTACTCGCAATCTTGAAAATTTGAATATGAAGAATGCCTTTTGTTGTGCGGCCATTGGCTTTCTCGATAATAGTGAAAACGCGGTGAAAGAAAATCGACATGCGCCTAAGAGCCTTGGCTCTATTGGAAGCCTCCAACCCCTTTTCTTGAGGTGGTTAGGGATCGATTCCCCATGTGGTTTACTCGACGATAGTGAAGACGCAGTGTGCGTGTGTGTGGGTATCCGCTGCTCCGCCATGGACCACGATCGCCTTTCCTCAAGTTCTACCTTTTGGCTTCGTTTTGTTACATTGTTATTTGCTGAGGAAGAGGATGATGATATTCGCAGCGTTGAATCCGTTGAATTAGAAAAGGGGGACTCAAAAGAGAAGAAGCCTTCTTCAAAAGGCAGGCGGGCTCGGACTGGGTATTCTGATTCCATTAGAGAATTGGACTTGAATTCTTTATATATTAAAGAGGAAGGAGCACTTGAGTGGTCTGCTTTGCATGAGGACTGCCTGAGAAGTTTAGAATATGAAGCTCCTTCTTCCAATGCCAGCACTTCTGATTCTGAGTGTACACCTGAAGCTGCAAATAATGCCCAATGGCGTGGCCTGCTTAAATTCATGAAAAAAGGAGGATCCCACATGCGCTTCGCTCATCCACCTAAAAATATTCCCAAACTCACCCGAAAAACAGTTAAACGAATCAAGGAGGAACTCATGCCTGGTCCACATTCTTCAGTTACATCCCCATCTCTTGATCCGGATTTTTACTGCTTCAAGTCTTCATGGATAAACTTTTCTTTTGCACAGCTCAACGCTGCCACCGACAACTTTAGTGATGGTATCGATCCCTTTATCCGAAATTTGTTGATTGGGAAGGGAGGTTATGCTGAGGTTTACAAAGGAAAAATGGAAGATGGGACATATGTTGCTATCAAACGGCTGATGAAAGGAAGCCAAGAGGAAATGACAGCTGATTTCTTGTCCGAACTCGGACCTCGAGAGAGACTGGATTGGAACATCAGATTTAAGGTTGCTTTAGGGACTGCTGCGGGCCTTCAATATCTGCACGAGGGATGTCAAAGAAGGATTATTCACAGAGATATCAAGGCTGCTAATATTCTGCTGTCAGAGGATTTTGAGCCTCAGGTGTCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACCGTGGACAAAATTGAAGGCACATTTGGTTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTAGATGAAAAGACTGATGTCTATGCTTATGGAGTGCTATTACTTGAGCTCATTACAGGAAGACAGGCTTTGGATAGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCGTTGCTGTCTGTCGATAAAATAAAAGAGTTGGCTGATCCATGTCTGAGTGATGCTTATGATGAAGAACAGATGAGAATTGTAGTGATGATAGCTTCCTTGTGTATAGAGCAGTGTTCAGTTGAGCGACCACATATGAGCGAGGTGTTGAAGACTCTAAGAGGAGGCGAAGAGGGCTTGAAGTTCTTAATGAAGCGGCAGAAGTCAAAACTGAGAAGGACGTATTCTGTAGAGCTGATAGACGCAGAGGATTACAACTCAACCAAGTACTTGAGTGACATGAATAGAGAGACGAGTCCTGAGAACTCTGATTTTTTGAATGAACAAAACATTCATAAGTAG 2610 0.4575 MLGDEPESGGSNFDLPEEVLRALPSDPFEQLDVARKITSIALSTRVNALESEASDLSAKLAEKDSLIAELQSQLESLDASLSETADKLVRADQDKESLLRENALISNTVRKLNRDLEVFRRTLMQSLQEDEENSGGASAQIGDDDASFPASRTSSMRTHIADTGYLLSDDREADATRPRVSPCLLLASQASTPRITPPGSPPSLSASVSPTRTSKPVSPRRHSISFSTSLSSSDTASQTGRTKVDGKEFFRQVRSRLSYEQFGAFLSNVKELNSHKQTKEETLRKADEIFGPENKDLHAIFEGLITRNLENLNMKNAFCCAAIGFLDNSENAVKENRHAPKSLGSIGSLQPLFLRWLGIDSPCGLLDDSEDAVCVCVGIRCSAMDHDRLSSSSTFWLRFVTLLFAEEEDDDIRSVESVELEKGDSKEKKPSSKGRRARTGYSDSIRELDLNSLYIKEEGALEWSALHEDCLRSLEYEAPSSNASTSDSECTPEAANNAQWRGLLKFMKKGGSHMRFAHPPKNIPKLTRKTVKRIKEELMPGPHSSVTSPSLDPDFYCFKSSWINFSFAQLNAATDNFSDGIDPFIRNLLIGKGGYAEVYKGKMEDGTYVAIKRLMKGSQEEMTADFLSELGPRERLDWNIRFKVALGTAAGLQYLHEGCQRRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPDQWTHHTVDKIEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELADPCLSDAYDEEQMRIVVMIASLCIEQCSVERPHMSEVLKTLRGGEEGLKFLMKRQKSKLRRTYSVELIDAEDYNSTKYLSDMNRETSPENSDFLNEQNIHK 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0206 869 Coils Coil 46 129 - -
Lele21g0206 869 MobiDBLite consensus disorder prediction 849 869 - -
Lele21g0206 869 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 623 824 - -
Lele21g0206 869 SMART serkin_6 584 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0206 869 SUPERFAMILY Protein kinase-like (PK-like) 580 809 IPR011009 -
Lele21g0206 869 Pfam Protein kinase domain 643 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0206 869 MobiDBLite consensus disorder prediction 416 439 - -
Lele21g0206 869 Gene3D Transferase(Phosphotransferase) domain 1 627 834 - -
Lele21g0206 869 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Lele21g0206 869 PANTHER OS08G0249100 PROTEIN 634 843 - -
Lele21g0206 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 663 675 IPR008271 GO:0004672|GO:0006468
Lele21g0206 869 MobiDBLite consensus disorder prediction 185 242 - -
Lele21g0206 869 MobiDBLite consensus disorder prediction 129 155 - -
Lele21g0206 869 ProSiteProfiles Protein kinase domain profile. 501 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0206 869 MobiDBLite consensus disorder prediction 205 242 - -
Lele21g0206 869 Gene3D Phosphorylase Kinase; domain 1 571 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0206 Lele-ChrLele21 1375288 1381624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0206 565 811 Receptor kinase-like Gene Family AT1G60800 39.527 3.55e-53 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele21g0206 Pkinase 5.3e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0206 21 1375288 1381624 Lele21g0206 21 1375288 1381624 ECH
Lele21g0206 21 1375288 1381624 Lele23g1846 23 21784491 21796141 hybridization
Lele21g0206 21 1375288 1381624 Lele24g0202 24 1313192 1315501 hybridization