Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0201 ATGGCAAACCAAGCTCCTTCTACTCCGACAACAACCACGTCTCCCTCATTGGAGCCGCCGCCACCTCCGCAGTCACCGCCACCATCGGTCCTCGATCAACCACCGGGGGCTTCTGAAATGGATGTGCAACATCGTCTTGCTGAAGATTCTTCATCTGCTTGGGACCTGGATTGCCTGTTAGATTTCAGCTTGGACGAGAATTTAGCTCTCTCCTTAGACGATTATCATCCTATTTCAGAGGTTCCTCAAAATCTGGAGCTTCCTAGTTCGGAGAAGGTTCGCAAGCGAGACCCCAGGTTGACTTGTTCCAATTTCCTGGCCGGTCGGGTCCCATGTGCATGCCCGGAGCTCGATGCTAAGCTTGAGGAAGAAGGTTTTCCTGTTAAGAAGCGCGCTCACACCGTCCAGGCATCGGCTGGGATTGCACGGTGCCAGGACATAGTTTTGAGTTATGGTGGAGTGTCAATTCTCATGTTTCACATATTATCAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGCCACAACAACCGAAGGCGTAGAAAGCCTACAGAAACCAGAGCTGCAGAAGATCATGAAGTTCAACCTGTCAAACAGACTGAGGATGATGTGGGAAAAGATAGTTCACATATAAGCAGTGAGATAAACGACATAGAAATTTCCCTGGAGCATGAAGATGGACAACTTACTGCCCCATGTTCGGCTCCTGATACCCTGAACATTCAGAATGATAGTTTTGTGTCCTTTGTTGCTTGTGGTGAAACACAAGCGAATGGTGGAAAAGAGAATTCTAACATTTCTTATTCACCACCATATTGTGAAAAGAGTGCTTACTCATCTATGTGCGCAACTGGTCGGGTATCTTTTAAGCTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGGCTACGGCATCAAATCTTCCAATGGTTGGCCAGTATGCCCCTTGAGCTGGAGGGTTATATTCGCCCTGGGTGTACAATTCTGACAGTTTTTGTTACTATGCCTAGATTTATGTGGACAAGCTTACTTAAAGACCCTCTGTATTATGTGCAAGACATAGTAGCTCCAGGAAAGATGCTATTTGGAAGAGGCACCATATTTGTTCATCTAAATGACATGGTCTTCTGCGTTTTGAAAGATGAAGCTTCTGTGATGGAAGTTCAGATAAAGGTGCATGCACCAAGGCTTCACTATGTTTATCCCACATACTTCGAGGCCGGAAAACCTATGGAATTTGTTGCTTGTGGAAGTAACTTGATGCAGCCTAAGTTTCGGTGTGAACATATCACCTCTTCTACACCTTGCCAAAATGTTGACCTGGATGTTTTGTTTTGGATTGCTATGCTCCCAGTGCTGAGATCTTTTGTTGATTGTAATTTTCATAGCCTCAGAGTTATTGCTAGAGGCCAAGAAATTATCTCAGCAAAGGACGAGAATATGGTGCCTGTCCAGTTTAACAAACCCAGTGACTTAGGCGGTGGCATTTGGGAGCCTCAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTCATTGGGGACGCTGAAATCTGCTCTGAATTGGAGACAATGCAGCAAAAACTAGATATATCTCTTCTTTCGAAACAAATGCAGAATGCATCTAGCAGTTCTATTTGCAGCTTCTGTGAAGCTTTTGCACTGAGACATACAGCATACTCAGACTTACTGTTAGATATAGCATGGCTGCTTAAGGATCCTACTTCAGAAGATTTTCATAGAGCCATGACAGCTTCACAAATTCAAAGATTTTGTTATTTGATAGACTTTCTCATGTGCAATGAATTAATTGTCATTTTGGGGAAAATATTACGGAATTTGAATATTTTGACAGAAAGCATGGAAATGAACAATGTGATTAACAGAATGAGTGAGGCTGACATGGCGTTACTACAGAAACACACGTGTCAAGCTAGAGAGTTCCTTTATCAGAAACATCATAGGGATGGAGATTTTGTCTTTCGCACTGTTTTTTCTGAAATGGAAGGACATAAAGTTGCTCCAAGCTGCTATCAAGATAACATGCGATCAGTTGTCACCGTCAGCAATCAGTTGCTTTTTGTTGATAATCCTAGACATGAAATGGACAGAGTCTACTACGGTCTTGGTGCCGAGTCAAGGGCAGACGCTAAATTGGAAGTGAGAAGTCCAGCTTGGGCTGACAAAAGTGAAAGGATACCTCTTTTGGGGAGTGATATTATAATGAACATGGAAGAGCTGCCTCGGAGATCTGGTTATCGACATCTCGTGAGGGGATTCTTGTCCTCACGGCCGGCCGTTCTCATGATTGCTTCAGTTGCTGTATGTCTTGGGGTTTGCGCAGCCCTCCTTCATCCTGGGAGGGTCGGTGAGTTTGCAGCATCCATGAGAAGGTGCTTGTTCAGCAATTCGTAG 2433 0.4414 MANQAPSTPTTTTSPSLEPPPPPQSPPPSVLDQPPGASEMDVQHRLAEDSSSAWDLDCLLDFSLDENLALSLDDYHPISEVPQNLELPSSEKVRKRDPRLTCSNFLAGRVPCACPELDAKLEEEGFPVKKRAHTVQASAGIARCQDIVLSYGGVSILMFHILSDFDEGKRSCRRKLERHNNRRRRKPTETRAAEDHEVQPVKQTEDDVGKDSSHISSEINDIEISLEHEDGQLTAPCSAPDTLNIQNDSFVSFVACGETQANGGKENSNISYSPPYCEKSAYSSMCATGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTVFVTMPRFMWTSLLKDPLYYVQDIVAPGKMLFGRGTIFVHLNDMVFCVLKDEASVMEVQIKVHAPRLHYVYPTYFEAGKPMEFVACGSNLMQPKFRCEHITSSTPCQNVDLDVLFWIAMLPVLRSFVDCNFHSLRVIARGQEIISAKDENMVPVQFNKPSDLGGGIWEPQVENESGLSNFIPVLIGDAEICSELETMQQKLDISLLSKQMQNASSSSICSFCEAFALRHTAYSDLLLDIAWLLKDPTSEDFHRAMTASQIQRFCYLIDFLMCNELIVILGKILRNLNILTESMEMNNVINRMSEADMALLQKHTCQAREFLYQKHHRDGDFVFRTVFSEMEGHKVAPSCYQDNMRSVVTVSNQLLFVDNPRHEMDRVYYGLGAESRADAKLEVRSPAWADKSERIPLLGSDIIMNMEELPRRSGYRHLVRGFLSSRPAVLMIASVAVCLGVCAALLHPGRVGEFAASMRRCLFSNS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0201 810 MobiDBLite consensus disorder prediction 176 214 - -
Lele21g0201 810 ProSiteProfiles Zinc finger SBP-type profile. 109 186 IPR004333 GO:0003677
Lele21g0201 810 SUPERFAMILY SBT domain 159 190 IPR036893 GO:0003677|GO:0005634
Lele21g0201 810 Pfam SBP domain 159 186 IPR004333 GO:0003677
Lele21g0201 810 MobiDBLite consensus disorder prediction 13 33 - -
Lele21g0201 810 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 159 604 IPR044817 GO:0003677
Lele21g0201 810 MobiDBLite consensus disorder prediction 1 41 - -
Lele21g0201 810 MobiDBLite consensus disorder prediction 187 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0201 Lele-ChrLele21 1346684 1352747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0201 39 803 SBP-box Gene Family AT5G18830 38.710 3.09e-170 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele21g0201 SBP 8.7e-07 No_clan