Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0190 ATGTTGTTTTGCTCCAATTGTCTTTTTCAATCACCACAGGATCCTTCTTTCCCCCAAAGCTTCAACGCCCTGCCTCCTGTGAACTTCTCCCCTCAGTCTCAGACCCTCAGTCACATGACCAAGTTTCGGATCGGAGAAGCTTCCGGCGAAAGCAGTCACATGAATAACAGCGGCATGGTGGATTATATGCTCCACAACAGCCCCCCTCCTCCTCCTCCTCAACAACCACCTTGTGGTTTTTATGGTACACCCGCTTGTTCTTCTTTTGATAAGCTGAGTTTCGCAGATGTGATGCAGTTTGCAGATTTCGGACCCAACTTGGCATTAAACCAGACCAAGAATAACTGTGCTACTGAAGGAGAAGAAGATCATTCTGGGATGGACCCCGTTTTCTTCCTCAAGTTCCCTGTGTTGAATGACAAATCCTTGGAGGATCATCAGAATCTGAAGGGGACAGGTGAAGAAGGAGGAGGAGTGATGAGAGAGGATGAAGTAGAAGGAGCTCGAGTCTCTGATAGTAATAATAAGTCTTTGCAGAAACATGGGTTTGTAGGAGAAGACATGGACAGGAATAACAGTAACCCTACAAGCACAGTTCAGGAGAACAACAACAACAATACAAATAATAATAAGAGCAAGAGGAAGAGACCCAGAAGCATCAAAACCAGCGAGGAGGTAGAGAGCCAGCGTATGACTCACATCGCCGTCGAAAGAAACCGTCGGAAGCAAATGAACGAGCACCTTCGCGTCCTCAGATCCCTCATGCCTGGTTCTTACGTCCAAAGGGGGGATCAAGCTTCTATAATAGGAGGAGCGATAGAGTTTGTGAGGGAATTAGAGCAGCTTCTTCAGTGCTTGGAGTCACAGAAGAGAAGGAGGTTACTGGGAGAAGCTCATTCAAGGCAACAAGTTGGGGATTCTTCTTCTGTTACAATACATCAGGCGCAGCAACCACAAGCTCCCTATTTTCCAGCTTTGGCGCCTTTGCCAAATGTTGAGTTTGAGAGTGGGCTCAGGGAAGAAACTGCAGAGAACAAGTCCTGTCTTGCTGACGTGGAAGTCAAGCTTATAGAGTTTGATGCGATGATCAAGATCCTATCAAGAAGAAGACCAGGCCAGTTGATTAAGACCATAGCTGCACTCGAAGATTTGCAGCTTATTATCCTCCACACAAATATCACCACCGTTGAACAAACTGTTCTTTATTCTTTCAATGTCAAGGTTGCAGGTGATTCAAGGTTTACAGCCGAAGATATAGCCAGCTCTGTCCAACAGATATTCAGTTTCATTCACGAGAACACTGGAATGTAA 1311 0.4592 MLFCSNCLFQSPQDPSFPQSFNALPPVNFSPQSQTLSHMTKFRIGEASGESSHMNNSGMVDYMLHNSPPPPPPQQPPCGFYGTPACSSFDKLSFADVMQFADFGPNLALNQTKNNCATEGEEDHSGMDPVFFLKFPVLNDKSLEDHQNLKGTGEEGGGVMREDEVEGARVSDSNNKSLQKHGFVGEDMDRNNSNPTSTVQENNNNNTNNNKSKRKRPRSIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAHSRQQVGDSSSVTIHQAQQPQAPYFPALAPLPNVEFESGLREETAENKSCLADVEVKLIEFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTVEQTVLYSFNVKVAGDSRFTAEDIASSVQQIFSFIHENTGM 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0190 436 SMART finulus 234 285 IPR011598 GO:0046983
Lele21g0190 436 MobiDBLite consensus disorder prediction 189 210 - -
Lele21g0190 436 FunFam Basic helix-loop-helix transcription factor 219 294 - -
Lele21g0190 436 CDD ACT_UUR-ACR-like 362 426 - -
Lele21g0190 436 CDD bHLH_AtFAMA_like 231 298 - -
Lele21g0190 436 PANTHER TRANSCRIPTION FACTOR FAMA 124 427 IPR044283 GO:0003700|GO:0010052
Lele21g0190 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 228 306 IPR036638 GO:0046983
Lele21g0190 436 MobiDBLite consensus disorder prediction 65 79 - -
Lele21g0190 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 228 279 IPR011598 GO:0046983
Lele21g0190 436 Gene3D - 221 294 IPR036638 GO:0046983
Lele21g0190 436 MobiDBLite consensus disorder prediction 47 79 - -
Lele21g0190 436 MobiDBLite consensus disorder prediction 146 170 - -
Lele21g0190 436 MobiDBLite consensus disorder prediction 146 231 - -
Lele21g0190 436 Pfam Helix-loop-helix DNA-binding domain 229 280 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0190 Lele-ChrLele21 1240123 1241646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0190 44 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 59.375 1.87e-147 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele21g0190 HLH 9.5e-10 No_clan